Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC9.48□□□□□ -0.89
Efnb3O35393 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC9.48□□□□□ -0.89
Efnb3O35393 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Efnb3O35393 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Efnb3O35393 Gm12314-201ENSMUST00000118104 538 ntBASIC9.48□□□□□ -0.89
Efnb3O35393 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC9.48□□□□□ -0.89
Efnb3O35393 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC9.48□□□□□ -0.89
Efnb3O35393 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Efnb3O35393 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC9.48□□□□□ -0.89
Efnb3O35393 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Efnb3O35393 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC9.48□□□□□ -0.89
Efnb3O35393 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC9.48□□□□□ -0.89
Efnb3O35393 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC9.48□□□□□ -0.89
Efnb3O35393 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC9.48□□□□□ -0.89
Efnb3O35393 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC9.48□□□□□ -0.89
Efnb3O35393 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Efnb3O35393 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Efnb3O35393 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Efnb3O35393 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Efnb3O35393 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Efnb3O35393 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Efnb3O35393 Gm43860-201ENSMUST00000201742 2705 ntBASIC9.48□□□□□ -0.89
Efnb3O35393 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Efnb3O35393 AC166359.1-201ENSMUST00000220243 1871 ntBASIC9.48□□□□□ -0.89
Efnb3O35393 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Efnb3O35393 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Efnb3O35393 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Efnb3O35393 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Efnb3O35393 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Efnb3O35393 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Efnb3O35393 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC9.48□□□□□ -0.89
Efnb3O35393 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Efnb3O35393 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Efnb3O35393 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Efnb3O35393 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Efnb3O35393 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Efnb3O35393 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Efnb3O35393 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Efnb3O35393 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Efnb3O35393 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC9.47□□□□□ -0.89
Efnb3O35393 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Efnb3O35393 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Efnb3O35393 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Efnb3O35393 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Efnb3O35393 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Efnb3O35393 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Efnb3O35393 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Efnb3O35393 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Efnb3O35393 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC9.47□□□□□ -0.89
Efnb3O35393 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Efnb3O35393 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Efnb3O35393 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC9.47□□□□□ -0.89
Efnb3O35393 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Efnb3O35393 Gm2606-201ENSMUST00000100754 1002 ntBASIC9.47□□□□□ -0.89
Efnb3O35393 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Efnb3O35393 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC9.47□□□□□ -0.89
Efnb3O35393 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Efnb3O35393 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC9.47□□□□□ -0.89
Efnb3O35393 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Efnb3O35393 Gm15172-201ENSMUST00000118945 1046 ntBASIC9.47□□□□□ -0.89
Efnb3O35393 Gm12286-201ENSMUST00000119246 1002 ntBASIC9.47□□□□□ -0.89
Efnb3O35393 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC9.47□□□□□ -0.89
Efnb3O35393 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Efnb3O35393 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Efnb3O35393 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Efnb3O35393 Gm43818-201ENSMUST00000200605 466 ntBASIC9.47□□□□□ -0.89
Efnb3O35393 AC153929.1-201ENSMUST00000219009 303 ntBASIC9.47□□□□□ -0.89
Efnb3O35393 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC9.47□□□□□ -0.89
Efnb3O35393 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Efnb3O35393 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Efnb3O35393 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Efnb3O35393 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Efnb3O35393 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Efnb3O35393 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Efnb3O35393 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Efnb3O35393 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Efnb3O35393 Rgr-203ENSMUST00000225070 4704 ntBASIC9.47□□□□□ -0.89
Efnb3O35393 Gm3287-205ENSMUST00000228893 1332 ntBASIC9.47□□□□□ -0.89
Efnb3O35393 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC9.47□□□□□ -0.89
Efnb3O35393 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Efnb3O35393 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Efnb3O35393 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Efnb3O35393 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC9.47□□□□□ -0.89
Efnb3O35393 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC9.47□□□□□ -0.89
Efnb3O35393 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Efnb3O35393 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Efnb3O35393 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Efnb3O35393 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Efnb3O35393 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Efnb3O35393 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Efnb3O35393 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC9.47□□□□□ -0.89
Efnb3O35393 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Efnb3O35393 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Efnb3O35393 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC9.46□□□□□ -0.89
Efnb3O35393 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Efnb3O35393 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Efnb3O35393 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Efnb3O35393 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Efnb3O35393 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Efnb3O35393 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms