Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Polr1aO35134 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Polr1aO35134 Gm13422-201ENSMUST00000118834 504 ntBASIC18.11■□□□□ 0.49
Polr1aO35134 Gm11979-201ENSMUST00000119629 743 ntBASIC18.11■□□□□ 0.49
Polr1aO35134 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC18.11■□□□□ 0.49
Polr1aO35134 Gm5342-201ENSMUST00000181982 1003 ntBASIC18.11■□□□□ 0.49
Polr1aO35134 Gm42430-201ENSMUST00000197209 616 ntBASIC18.11■□□□□ 0.49
Polr1aO35134 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC18.11■□□□□ 0.49
Polr1aO35134 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Polr1aO35134 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC18.11■□□□□ 0.49
Polr1aO35134 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC18.11■□□□□ 0.49
Polr1aO35134 Lect2-202ENSMUST00000225183 823 ntBASIC18.11■□□□□ 0.49
Polr1aO35134 CT025602.2-201ENSMUST00000226553 772 ntBASIC18.11■□□□□ 0.49
Polr1aO35134 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Polr1aO35134 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Polr1aO35134 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Polr1aO35134 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Polr1aO35134 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Polr1aO35134 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC18.11■□□□□ 0.49
Polr1aO35134 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Polr1aO35134 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Polr1aO35134 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Polr1aO35134 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Polr1aO35134 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Polr1aO35134 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Polr1aO35134 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Polr1aO35134 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Polr1aO35134 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Polr1aO35134 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Polr1aO35134 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
Polr1aO35134 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Polr1aO35134 Gm11700-201ENSMUST00000119409 403 ntBASIC18.1■□□□□ 0.49
Polr1aO35134 Gm15329-201ENSMUST00000121408 155 ntBASIC18.1■□□□□ 0.49
Polr1aO35134 Gm16030-201ENSMUST00000159098 603 ntBASIC18.1■□□□□ 0.49
Polr1aO35134 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC18.1■□□□□ 0.49
Polr1aO35134 Gm9369-201ENSMUST00000196009 733 ntBASIC18.1■□□□□ 0.49
Polr1aO35134 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Polr1aO35134 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Polr1aO35134 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Polr1aO35134 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Polr1aO35134 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Polr1aO35134 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Polr1aO35134 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Polr1aO35134 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Polr1aO35134 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Polr1aO35134 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Polr1aO35134 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC18.1■□□□□ 0.49
Polr1aO35134 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Polr1aO35134 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Polr1aO35134 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Polr1aO35134 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Polr1aO35134 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Polr1aO35134 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC18.09■□□□□ 0.49
Polr1aO35134 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Polr1aO35134 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Polr1aO35134 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Polr1aO35134 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Polr1aO35134 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Polr1aO35134 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Polr1aO35134 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC18.09■□□□□ 0.49
Polr1aO35134 Gm5308-201ENSMUST00000196752 1354 ntBASIC18.09■□□□□ 0.49
Polr1aO35134 Gm30946-201ENSMUST00000198288 724 ntBASIC18.09■□□□□ 0.49
Polr1aO35134 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC18.09■□□□□ 0.49
Polr1aO35134 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC18.09■□□□□ 0.49
Polr1aO35134 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Polr1aO35134 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Polr1aO35134 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Polr1aO35134 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Polr1aO35134 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Polr1aO35134 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Polr1aO35134 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Polr1aO35134 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
Polr1aO35134 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Polr1aO35134 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Polr1aO35134 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Polr1aO35134 Gm45428-201ENSMUST00000209619 1789 ntBASIC18.09■□□□□ 0.49
Polr1aO35134 AC108858.2-201ENSMUST00000228186 1425 ntBASIC18.09■□□□□ 0.49
Polr1aO35134 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC18.09■□□□□ 0.49
Polr1aO35134 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC18.09■□□□□ 0.49
Polr1aO35134 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC18.09■□□□□ 0.49
Polr1aO35134 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC18.09■□□□□ 0.49
Polr1aO35134 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Polr1aO35134 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC18.09■□□□□ 0.49
Polr1aO35134 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC18.09■□□□□ 0.49
Polr1aO35134 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Polr1aO35134 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Polr1aO35134 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Polr1aO35134 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Polr1aO35134 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Polr1aO35134 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Polr1aO35134 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Polr1aO35134 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Polr1aO35134 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Polr1aO35134 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Polr1aO35134 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Polr1aO35134 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Polr1aO35134 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Polr1aO35134 Gm23612-201ENSMUST00000103823 110 ntBASIC18.08■□□□□ 0.48
Polr1aO35134 Gm25562-201ENSMUST00000104608 133 ntBASIC18.08■□□□□ 0.48
Polr1aO35134 Gm11578-201ENSMUST00000118530 459 ntBASIC18.08■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms