Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Shisa8J3QNX5 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Shisa8J3QNX5 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Shisa8J3QNX5 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Shisa8J3QNX5 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Shisa8J3QNX5 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Shisa8J3QNX5 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Shisa8J3QNX5 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Shisa8J3QNX5 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Shisa8J3QNX5 Gm44913-201ENSMUST00000208060 2990 ntBASIC10.92□□□□□ -0.66
Shisa8J3QNX5 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Shisa8J3QNX5 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Shisa8J3QNX5 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Shisa8J3QNX5 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Shisa8J3QNX5 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Shisa8J3QNX5 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Shisa8J3QNX5 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Shisa8J3QNX5 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Shisa8J3QNX5 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Shisa8J3QNX5 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Shisa8J3QNX5 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC10.91□□□□□ -0.66
Shisa8J3QNX5 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Shisa8J3QNX5 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Shisa8J3QNX5 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Shisa8J3QNX5 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Shisa8J3QNX5 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Shisa8J3QNX5 Gm13736-201ENSMUST00000119272 253 ntBASIC10.91□□□□□ -0.66
Shisa8J3QNX5 Gm12960-201ENSMUST00000120017 1066 ntBASIC10.91□□□□□ -0.66
Shisa8J3QNX5 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Shisa8J3QNX5 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC10.91□□□□□ -0.66
Shisa8J3QNX5 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC10.91□□□□□ -0.66
Shisa8J3QNX5 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC10.91□□□□□ -0.66
Shisa8J3QNX5 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Shisa8J3QNX5 Gm8515-201ENSMUST00000194852 576 ntBASIC10.91□□□□□ -0.66
Shisa8J3QNX5 Gm6745-201ENSMUST00000199216 526 ntBASIC10.91□□□□□ -0.66
Shisa8J3QNX5 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC10.91□□□□□ -0.66
Shisa8J3QNX5 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC10.91□□□□□ -0.66
Shisa8J3QNX5 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC10.91□□□□□ -0.66
Shisa8J3QNX5 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Shisa8J3QNX5 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
Shisa8J3QNX5 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Shisa8J3QNX5 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
Shisa8J3QNX5 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Shisa8J3QNX5 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Shisa8J3QNX5 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Shisa8J3QNX5 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Shisa8J3QNX5 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Shisa8J3QNX5 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Shisa8J3QNX5 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Shisa8J3QNX5 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
Shisa8J3QNX5 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Shisa8J3QNX5 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Shisa8J3QNX5 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Shisa8J3QNX5 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Shisa8J3QNX5 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Shisa8J3QNX5 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Shisa8J3QNX5 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Shisa8J3QNX5 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Shisa8J3QNX5 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Shisa8J3QNX5 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Shisa8J3QNX5 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Shisa8J3QNX5 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Shisa8J3QNX5 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Shisa8J3QNX5 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Shisa8J3QNX5 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Shisa8J3QNX5 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Shisa8J3QNX5 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Shisa8J3QNX5 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Shisa8J3QNX5 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Shisa8J3QNX5 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Shisa8J3QNX5 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Shisa8J3QNX5 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Shisa8J3QNX5 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Shisa8J3QNX5 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Shisa8J3QNX5 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Shisa8J3QNX5 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC10.9□□□□□ -0.66
Shisa8J3QNX5 Gm44152-201ENSMUST00000205007 1691 ntBASIC10.9□□□□□ -0.66
Shisa8J3QNX5 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Shisa8J3QNX5 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Shisa8J3QNX5 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Shisa8J3QNX5 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Shisa8J3QNX5 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Shisa8J3QNX5 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC10.9□□□□□ -0.66
Shisa8J3QNX5 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC10.9□□□□□ -0.66
Shisa8J3QNX5 Gm8738-201ENSMUST00000172606 329 ntBASIC10.9□□□□□ -0.66
Shisa8J3QNX5 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Shisa8J3QNX5 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Shisa8J3QNX5 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Shisa8J3QNX5 Gtpbp10-211ENSMUST00000198799 648 ntBASIC10.9□□□□□ -0.66
Shisa8J3QNX5 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Shisa8J3QNX5 Gm45059-201ENSMUST00000205558 1077 ntBASIC10.9□□□□□ -0.66
Shisa8J3QNX5 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC10.9□□□□□ -0.66
Shisa8J3QNX5 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Shisa8J3QNX5 Gm45925-201ENSMUST00000218882 744 ntBASIC10.9□□□□□ -0.66
Shisa8J3QNX5 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Shisa8J3QNX5 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC10.9□□□□□ -0.66
Shisa8J3QNX5 Gm10076-201ENSMUST00000073238 384 ntBASIC10.9□□□□□ -0.66
Shisa8J3QNX5 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Shisa8J3QNX5 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Shisa8J3QNX5 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms