Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Colca2F8VPY8 Gm12179-201ENSMUST00000118344 1272 ntBASIC11.28□□□□□ -0.6
Colca2F8VPY8 Gm12036-201ENSMUST00000120008 530 ntBASIC11.28□□□□□ -0.6
Colca2F8VPY8 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Colca2F8VPY8 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC11.28□□□□□ -0.6
Colca2F8VPY8 Gm25492-201ENSMUST00000157383 129 ntBASIC11.28□□□□□ -0.6
Colca2F8VPY8 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Colca2F8VPY8 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Colca2F8VPY8 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC11.28□□□□□ -0.6
Colca2F8VPY8 Gm24809-201ENSMUST00000175318 271 ntBASIC11.28□□□□□ -0.6
Colca2F8VPY8 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Colca2F8VPY8 Gm9916-201ENSMUST00000192943 1228 ntBASIC11.28□□□□□ -0.6
Colca2F8VPY8 Gm42433-201ENSMUST00000196806 940 ntBASIC11.28□□□□□ -0.6
Colca2F8VPY8 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Colca2F8VPY8 BC106175-202ENSMUST00000219344 1213 ntBASIC11.28□□□□□ -0.6
Colca2F8VPY8 Arhgef33-207ENSMUST00000224966 490 ntBASIC11.28□□□□□ -0.6
Colca2F8VPY8 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Colca2F8VPY8 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Colca2F8VPY8 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Colca2F8VPY8 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Colca2F8VPY8 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Colca2F8VPY8 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Colca2F8VPY8 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Colca2F8VPY8 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.28□□□□□ -0.6
Colca2F8VPY8 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Colca2F8VPY8 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Colca2F8VPY8 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Colca2F8VPY8 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Colca2F8VPY8 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Colca2F8VPY8 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Colca2F8VPY8 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Colca2F8VPY8 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Colca2F8VPY8 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.6
Colca2F8VPY8 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Colca2F8VPY8 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC11.27□□□□□ -0.6
Colca2F8VPY8 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Colca2F8VPY8 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Colca2F8VPY8 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Colca2F8VPY8 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Colca2F8VPY8 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Colca2F8VPY8 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Colca2F8VPY8 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.27□□□□□ -0.6
Colca2F8VPY8 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Colca2F8VPY8 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC11.27□□□□□ -0.61
Colca2F8VPY8 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Colca2F8VPY8 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC11.27□□□□□ -0.61
Colca2F8VPY8 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Colca2F8VPY8 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Colca2F8VPY8 Gm12194-201ENSMUST00000117756 1012 ntBASIC11.27□□□□□ -0.61
Colca2F8VPY8 Mir1905-201ENSMUST00000122779 82 ntBASIC11.27□□□□□ -0.61
Colca2F8VPY8 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC11.27□□□□□ -0.61
Colca2F8VPY8 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Colca2F8VPY8 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Colca2F8VPY8 Gm20414-201ENSMUST00000172918 646 ntBASIC11.27□□□□□ -0.61
Colca2F8VPY8 Mir6941-201ENSMUST00000184711 59 ntBASIC11.27□□□□□ -0.61
Colca2F8VPY8 Gm18801-201ENSMUST00000186616 536 ntBASIC11.27□□□□□ -0.61
Colca2F8VPY8 Gm5700-201ENSMUST00000191483 989 ntBASIC11.27□□□□□ -0.61
Colca2F8VPY8 Gm42655-201ENSMUST00000202782 1134 ntBASIC11.27□□□□□ -0.61
Colca2F8VPY8 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.27□□□□□ -0.61
Colca2F8VPY8 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.27□□□□□ -0.61
Colca2F8VPY8 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Colca2F8VPY8 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Colca2F8VPY8 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Colca2F8VPY8 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Colca2F8VPY8 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Colca2F8VPY8 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Colca2F8VPY8 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Colca2F8VPY8 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Colca2F8VPY8 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Colca2F8VPY8 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC11.27□□□□□ -0.61
Colca2F8VPY8 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Colca2F8VPY8 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Colca2F8VPY8 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Colca2F8VPY8 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Colca2F8VPY8 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Colca2F8VPY8 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Colca2F8VPY8 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
Colca2F8VPY8 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Colca2F8VPY8 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.26□□□□□ -0.61
Colca2F8VPY8 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Colca2F8VPY8 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Colca2F8VPY8 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Colca2F8VPY8 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Colca2F8VPY8 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Colca2F8VPY8 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Colca2F8VPY8 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Colca2F8VPY8 Acot6-202ENSMUST00000222921 3622 ntBASIC11.26□□□□□ -0.61
Colca2F8VPY8 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Colca2F8VPY8 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
Colca2F8VPY8 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Colca2F8VPY8 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Colca2F8VPY8 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
Colca2F8VPY8 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Colca2F8VPY8 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Colca2F8VPY8 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Colca2F8VPY8 Gm11619-201ENSMUST00000117474 237 ntBASIC11.26□□□□□ -0.61
Colca2F8VPY8 Gm12663-201ENSMUST00000118481 958 ntBASIC11.26□□□□□ -0.61
Colca2F8VPY8 Gm14234-201ENSMUST00000119539 845 ntBASIC11.26□□□□□ -0.61
Colca2F8VPY8 Gm14441-201ENSMUST00000121960 540 ntBASIC11.26□□□□□ -0.61
Colca2F8VPY8 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms