Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a3E9PWQ3 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a3E9PWQ3 Rbp2-204ENSMUST00000189446 803 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
Col6a3E9PWQ3 Gm42952-204ENSMUST00000198572 408 ntTSL 3 BASIC11.59□□□□□ -0.55
Col6a3E9PWQ3 CT030035.1-201ENSMUST00000223964 935 ntBASIC11.59□□□□□ -0.55
Col6a3E9PWQ3 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a3E9PWQ3 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a3E9PWQ3 AC132833.1-202ENSMUST00000228875 1690 ntBASIC11.59□□□□□ -0.55
Col6a3E9PWQ3 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a3E9PWQ3 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a3E9PWQ3 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Col6a3E9PWQ3 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a3E9PWQ3 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a3E9PWQ3 Stard3nl-205ENSMUST00000197565 1391 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Col6a3E9PWQ3 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Col6a3E9PWQ3 4930517J16Rik-201ENSMUST00000193095 1568 ntBASIC11.59□□□□□ -0.55
Col6a3E9PWQ3 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a3E9PWQ3 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a3E9PWQ3 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a3E9PWQ3 Gm37858-201ENSMUST00000192759 1231 ntBASIC11.59□□□□□ -0.55
Col6a3E9PWQ3 Id2-203ENSMUST00000222667 958 ntBASIC11.59□□□□□ -0.55
Col6a3E9PWQ3 Eif3k-201ENSMUST00000066070 774 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a3E9PWQ3 Olfr1057-201ENSMUST00000099892 948 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Col6a3E9PWQ3 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Col6a3E9PWQ3 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a3E9PWQ3 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a3E9PWQ3 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.59□□□□□ -0.55
Col6a3E9PWQ3 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC11.59□□□□□ -0.55
Col6a3E9PWQ3 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Col6a3E9PWQ3 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a3E9PWQ3 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a3E9PWQ3 AC165351.1-201ENSMUST00000219078 2020 ntBASIC11.59□□□□□ -0.55
Col6a3E9PWQ3 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a3E9PWQ3 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Col6a3E9PWQ3 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a3E9PWQ3 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC11.59□□□□□ -0.55
Col6a3E9PWQ3 Gm12397-201ENSMUST00000117674 615 ntBASIC11.59□□□□□ -0.55
Col6a3E9PWQ3 Gm8876-201ENSMUST00000120768 1122 ntBASIC11.59□□□□□ -0.55
Col6a3E9PWQ3 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC11.59□□□□□ -0.55
Col6a3E9PWQ3 Atp5e-201ENSMUST00000016396 421 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a3E9PWQ3 Gm8488-201ENSMUST00000176112 1280 ntBASIC11.59□□□□□ -0.55
Col6a3E9PWQ3 CT030170.2-201ENSMUST00000223267 126 ntBASIC11.59□□□□□ -0.55
Col6a3E9PWQ3 AC102327.1-201ENSMUST00000226389 742 ntBASIC11.59□□□□□ -0.55
Col6a3E9PWQ3 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Col6a3E9PWQ3 Dpep2-202ENSMUST00000117555 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Col6a3E9PWQ3 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a3E9PWQ3 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a3E9PWQ3 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a3E9PWQ3 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a3E9PWQ3 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.58□□□□□ -0.56
Col6a3E9PWQ3 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.58□□□□□ -0.56
Col6a3E9PWQ3 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC11.58□□□□□ -0.56
Col6a3E9PWQ3 Gm15599-201ENSMUST00000122283 1345 ntBASIC11.58□□□□□ -0.56
Col6a3E9PWQ3 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a3E9PWQ3 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC11.58□□□□□ -0.56
Col6a3E9PWQ3 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a3E9PWQ3 Scgb1b29-201ENSMUST00000108094 282 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a3E9PWQ3 Gm14997-201ENSMUST00000119232 636 ntBASIC11.58□□□□□ -0.56
Col6a3E9PWQ3 Gm6238-201ENSMUST00000120999 465 ntBASIC11.58□□□□□ -0.56
Col6a3E9PWQ3 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a3E9PWQ3 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a3E9PWQ3 Gm21778-201ENSMUST00000178779 471 ntBASIC11.58□□□□□ -0.56
Col6a3E9PWQ3 A630023A22Rik-201ENSMUST00000178958 1277 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a3E9PWQ3 Gm3898-201ENSMUST00000180221 613 ntTSL 5 BASIC11.58□□□□□ -0.56
Col6a3E9PWQ3 Gm4960-201ENSMUST00000182928 1001 ntBASIC11.58□□□□□ -0.56
Col6a3E9PWQ3 Ift22-204ENSMUST00000200153 670 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a3E9PWQ3 Gm42732-201ENSMUST00000202887 1197 ntBASIC11.58□□□□□ -0.56
Col6a3E9PWQ3 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Col6a3E9PWQ3 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a3E9PWQ3 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a3E9PWQ3 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.58□□□□□ -0.56
Col6a3E9PWQ3 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a3E9PWQ3 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a3E9PWQ3 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a3E9PWQ3 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a3E9PWQ3 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a3E9PWQ3 Map1b-203ENSMUST00000223725 2669 ntBASIC11.58□□□□□ -0.56
Col6a3E9PWQ3 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a3E9PWQ3 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a3E9PWQ3 Defa33-201ENSMUST00000120874 426 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a3E9PWQ3 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a3E9PWQ3 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC11.58□□□□□ -0.56
Col6a3E9PWQ3 Gm23479-201ENSMUST00000158876 122 ntBASIC11.58□□□□□ -0.56
Col6a3E9PWQ3 Defa2-201ENSMUST00000170275 426 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a3E9PWQ3 Rarres2-203ENSMUST00000204182 672 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Col6a3E9PWQ3 Gm5148-201ENSMUST00000079755 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a3E9PWQ3 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Col6a3E9PWQ3 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a3E9PWQ3 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Col6a3E9PWQ3 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a3E9PWQ3 Pnlip-201ENSMUST00000057270 1485 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a3E9PWQ3 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a3E9PWQ3 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a3E9PWQ3 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a3E9PWQ3 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.58□□□□□ -0.56
Col6a3E9PWQ3 Cd247-202ENSMUST00000027849 1317 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a3E9PWQ3 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a3E9PWQ3 Fhl3-202ENSMUST00000106199 1139 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Col6a3E9PWQ3 Gm8163-201ENSMUST00000122020 1060 ntBASIC11.57□□□□□ -0.56
Col6a3E9PWQ3 Mok-204ENSMUST00000177224 551 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms