Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cfap99A0A140LIX9 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cfap99A0A140LIX9 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cfap99A0A140LIX9 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cfap99A0A140LIX9 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Cfap99A0A140LIX9 Nupl1-206ENSMUST00000225111 2936 ntBASIC14.36□□□□□ -0.11
Cfap99A0A140LIX9 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC14.36□□□□□ -0.11
Cfap99A0A140LIX9 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Cfap99A0A140LIX9 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cfap99A0A140LIX9 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cfap99A0A140LIX9 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cfap99A0A140LIX9 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cfap99A0A140LIX9 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cfap99A0A140LIX9 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cfap99A0A140LIX9 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cfap99A0A140LIX9 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC14.35□□□□□ -0.11
Cfap99A0A140LIX9 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cfap99A0A140LIX9 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cfap99A0A140LIX9 Gm18263-201ENSMUST00000220846 1928 ntBASIC14.35□□□□□ -0.11
Cfap99A0A140LIX9 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cfap99A0A140LIX9 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cfap99A0A140LIX9 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC14.35□□□□□ -0.11
Cfap99A0A140LIX9 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Cfap99A0A140LIX9 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Cfap99A0A140LIX9 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Cfap99A0A140LIX9 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC14.35□□□□□ -0.11
Cfap99A0A140LIX9 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cfap99A0A140LIX9 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cfap99A0A140LIX9 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Cfap99A0A140LIX9 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cfap99A0A140LIX9 Gm17827-201ENSMUST00000211825 742 ntBASIC14.35□□□□□ -0.11
Cfap99A0A140LIX9 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cfap99A0A140LIX9 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Cfap99A0A140LIX9 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cfap99A0A140LIX9 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cfap99A0A140LIX9 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cfap99A0A140LIX9 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cfap99A0A140LIX9 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cfap99A0A140LIX9 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cfap99A0A140LIX9 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Cfap99A0A140LIX9 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Cfap99A0A140LIX9 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cfap99A0A140LIX9 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cfap99A0A140LIX9 AC160405.1-201ENSMUST00000218207 1545 ntBASIC14.35□□□□□ -0.11
Cfap99A0A140LIX9 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC14.35□□□□□ -0.11
Cfap99A0A140LIX9 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cfap99A0A140LIX9 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cfap99A0A140LIX9 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cfap99A0A140LIX9 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cfap99A0A140LIX9 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cfap99A0A140LIX9 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC14.34□□□□□ -0.11
Cfap99A0A140LIX9 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC14.34□□□□□ -0.11
Cfap99A0A140LIX9 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC14.34□□□□□ -0.11
Cfap99A0A140LIX9 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cfap99A0A140LIX9 Gm13142-201ENSMUST00000117213 1453 ntBASIC14.34□□□□□ -0.11
Cfap99A0A140LIX9 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cfap99A0A140LIX9 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cfap99A0A140LIX9 Gm12501-201ENSMUST00000119163 529 ntBASIC14.34□□□□□ -0.11
Cfap99A0A140LIX9 Gm6506-201ENSMUST00000119775 1136 ntBASIC14.34□□□□□ -0.11
Cfap99A0A140LIX9 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC14.34□□□□□ -0.11
Cfap99A0A140LIX9 Gm12208-201ENSMUST00000122004 163 ntBASIC14.34□□□□□ -0.11
Cfap99A0A140LIX9 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC14.34□□□□□ -0.11
Cfap99A0A140LIX9 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cfap99A0A140LIX9 Gm43962-201ENSMUST00000203898 190 ntBASIC14.34□□□□□ -0.11
Cfap99A0A140LIX9 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC14.34□□□□□ -0.11
Cfap99A0A140LIX9 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC14.34□□□□□ -0.11
Cfap99A0A140LIX9 Gm19994-201ENSMUST00000217086 586 ntBASIC14.34□□□□□ -0.11
Cfap99A0A140LIX9 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC14.34□□□□□ -0.11
Cfap99A0A140LIX9 Gm270-201ENSMUST00000223010 976 ntBASIC14.34□□□□□ -0.11
Cfap99A0A140LIX9 AC154849.4-201ENSMUST00000224868 365 ntBASIC14.34□□□□□ -0.11
Cfap99A0A140LIX9 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cfap99A0A140LIX9 Gm10179-201ENSMUST00000086233 688 ntBASIC14.34□□□□□ -0.11
Cfap99A0A140LIX9 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Cfap99A0A140LIX9 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cfap99A0A140LIX9 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cfap99A0A140LIX9 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cfap99A0A140LIX9 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cfap99A0A140LIX9 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cfap99A0A140LIX9 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cfap99A0A140LIX9 Gm5525-201ENSMUST00000190438 1312 ntBASIC14.34□□□□□ -0.11
Cfap99A0A140LIX9 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cfap99A0A140LIX9 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cfap99A0A140LIX9 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cfap99A0A140LIX9 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cfap99A0A140LIX9 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC14.34□□□□□ -0.11
Cfap99A0A140LIX9 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cfap99A0A140LIX9 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cfap99A0A140LIX9 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cfap99A0A140LIX9 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cfap99A0A140LIX9 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cfap99A0A140LIX9 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cfap99A0A140LIX9 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.11
Cfap99A0A140LIX9 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cfap99A0A140LIX9 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cfap99A0A140LIX9 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cfap99A0A140LIX9 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC14.33□□□□□ -0.12
Cfap99A0A140LIX9 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Cfap99A0A140LIX9 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cfap99A0A140LIX9 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cfap99A0A140LIX9 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 236.6 ms