Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav5-4A0A075B652 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav5-4A0A075B652 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav5-4A0A075B652 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav5-4A0A075B652 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC10.09□□□□□ -0.79
Trav5-4A0A075B652 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav5-4A0A075B652 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC10.09□□□□□ -0.79
Trav5-4A0A075B652 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav5-4A0A075B652 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Trav5-4A0A075B652 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav5-4A0A075B652 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Trav5-4A0A075B652 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav5-4A0A075B652 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav5-4A0A075B652 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav5-4A0A075B652 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav5-4A0A075B652 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Trav5-4A0A075B652 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav5-4A0A075B652 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav5-4A0A075B652 Gm14999-201ENSMUST00000121039 624 ntBASIC10.09□□□□□ -0.79
Trav5-4A0A075B652 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC10.09□□□□□ -0.79
Trav5-4A0A075B652 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav5-4A0A075B652 Gm5637-201ENSMUST00000153890 1119 ntBASIC10.09□□□□□ -0.79
Trav5-4A0A075B652 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC10.09□□□□□ -0.79
Trav5-4A0A075B652 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC10.09□□□□□ -0.79
Trav5-4A0A075B652 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Trav5-4A0A075B652 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav5-4A0A075B652 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC10.09□□□□□ -0.79
Trav5-4A0A075B652 Dhrs4-202ENSMUST00000226168 828 ntBASIC10.09□□□□□ -0.79
Trav5-4A0A075B652 AC126253.1-202ENSMUST00000226732 835 ntBASIC10.09□□□□□ -0.79
Trav5-4A0A075B652 AC154462.2-201ENSMUST00000227519 370 ntBASIC10.09□□□□□ -0.79
Trav5-4A0A075B652 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav5-4A0A075B652 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav5-4A0A075B652 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav5-4A0A075B652 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav5-4A0A075B652 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav5-4A0A075B652 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav5-4A0A075B652 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav5-4A0A075B652 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav5-4A0A075B652 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav5-4A0A075B652 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav5-4A0A075B652 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Trav5-4A0A075B652 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Trav5-4A0A075B652 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav5-4A0A075B652 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Trav5-4A0A075B652 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Trav5-4A0A075B652 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav5-4A0A075B652 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav5-4A0A075B652 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Trav5-4A0A075B652 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav5-4A0A075B652 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav5-4A0A075B652 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav5-4A0A075B652 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav5-4A0A075B652 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav5-4A0A075B652 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav5-4A0A075B652 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Trav5-4A0A075B652 Gm42463-201ENSMUST00000198041 4886 ntBASIC10.08□□□□□ -0.8
Trav5-4A0A075B652 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav5-4A0A075B652 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav5-4A0A075B652 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav5-4A0A075B652 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav5-4A0A075B652 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav5-4A0A075B652 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav5-4A0A075B652 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav5-4A0A075B652 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC10.08□□□□□ -0.8
Trav5-4A0A075B652 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav5-4A0A075B652 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Trav5-4A0A075B652 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav5-4A0A075B652 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav5-4A0A075B652 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
Trav5-4A0A075B652 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav5-4A0A075B652 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav5-4A0A075B652 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav5-4A0A075B652 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC10.08□□□□□ -0.8
Trav5-4A0A075B652 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav5-4A0A075B652 Gm12058-201ENSMUST00000118614 437 ntBASIC10.08□□□□□ -0.8
Trav5-4A0A075B652 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC10.08□□□□□ -0.8
Trav5-4A0A075B652 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav5-4A0A075B652 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC10.08□□□□□ -0.8
Trav5-4A0A075B652 Gm8494-201ENSMUST00000178171 1233 ntBASIC10.08□□□□□ -0.8
Trav5-4A0A075B652 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav5-4A0A075B652 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav5-4A0A075B652 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav5-4A0A075B652 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav5-4A0A075B652 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Trav5-4A0A075B652 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav5-4A0A075B652 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav5-4A0A075B652 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav5-4A0A075B652 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav5-4A0A075B652 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Trav5-4A0A075B652 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav5-4A0A075B652 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav5-4A0A075B652 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav5-4A0A075B652 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC10.08□□□□□ -0.8
Trav5-4A0A075B652 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav5-4A0A075B652 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav5-4A0A075B652 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav5-4A0A075B652 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav5-4A0A075B652 Gm44831-201ENSMUST00000208469 2989 ntBASIC10.08□□□□□ -0.8
Trav5-4A0A075B652 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav5-4A0A075B652 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms