Protein–RNA interactions for Protein: Q9Z2V5

Hdac6, Histone deacetylase 6, mousemouse

Predictions only

Length 1,149 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac6Q9Z2V5 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Hdac6Q9Z2V5 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
Hdac6Q9Z2V5 Gm7160-202ENSMUST00000188519 1027 ntBASIC26.35■■□□□ 1.81
Hdac6Q9Z2V5 Spcs1-204ENSMUST00000226782 949 ntBASIC26.35■■□□□ 1.81
Hdac6Q9Z2V5 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Hdac6Q9Z2V5 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC26.34■■□□□ 1.81
Hdac6Q9Z2V5 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Hdac6Q9Z2V5 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
Hdac6Q9Z2V5 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC26.34■■□□□ 1.81
Hdac6Q9Z2V5 Gm43530-201ENSMUST00000195920 274 ntBASIC26.34■■□□□ 1.81
Hdac6Q9Z2V5 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Hdac6Q9Z2V5 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Hdac6Q9Z2V5 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Hdac6Q9Z2V5 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.81
Hdac6Q9Z2V5 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Hdac6Q9Z2V5 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC26.33■■□□□ 1.81
Hdac6Q9Z2V5 Gm26833-201ENSMUST00000180899 440 ntBASIC26.33■■□□□ 1.81
Hdac6Q9Z2V5 Gm7291-201ENSMUST00000199147 382 ntBASIC26.33■■□□□ 1.81
Hdac6Q9Z2V5 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC26.33■■□□□ 1.81
Hdac6Q9Z2V5 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC26.33■■□□□ 1.81
Hdac6Q9Z2V5 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC26.33■■□□□ 1.81
Hdac6Q9Z2V5 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Hdac6Q9Z2V5 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
Hdac6Q9Z2V5 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Hdac6Q9Z2V5 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC26.32■■□□□ 1.8
Hdac6Q9Z2V5 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Hdac6Q9Z2V5 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC26.31■■□□□ 1.8
Hdac6Q9Z2V5 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Hdac6Q9Z2V5 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Hdac6Q9Z2V5 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Hdac6Q9Z2V5 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Hdac6Q9Z2V5 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC26.31■■□□□ 1.8
Hdac6Q9Z2V5 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
Hdac6Q9Z2V5 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Hdac6Q9Z2V5 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Hdac6Q9Z2V5 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Hdac6Q9Z2V5 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Hdac6Q9Z2V5 Gm26571-201ENSMUST00000181399 666 ntBASIC26.3■■□□□ 1.8
Hdac6Q9Z2V5 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
Hdac6Q9Z2V5 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Hdac6Q9Z2V5 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Hdac6Q9Z2V5 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Hdac6Q9Z2V5 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
Hdac6Q9Z2V5 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Hdac6Q9Z2V5 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Hdac6Q9Z2V5 Gm10493-201ENSMUST00000097270 612 ntBASIC26.29■■□□□ 1.8
Hdac6Q9Z2V5 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Hdac6Q9Z2V5 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Hdac6Q9Z2V5 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Hdac6Q9Z2V5 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC26.28■■□□□ 1.8
Hdac6Q9Z2V5 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC26.28■■□□□ 1.8
Hdac6Q9Z2V5 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC26.28■■□□□ 1.8
Hdac6Q9Z2V5 Gm43060-201ENSMUST00000200621 289 ntBASIC26.28■■□□□ 1.8
Hdac6Q9Z2V5 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
Hdac6Q9Z2V5 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Hdac6Q9Z2V5 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Hdac6Q9Z2V5 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Hdac6Q9Z2V5 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Hdac6Q9Z2V5 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
Hdac6Q9Z2V5 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Hdac6Q9Z2V5 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Hdac6Q9Z2V5 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Hdac6Q9Z2V5 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC26.26■■□□□ 1.79
Hdac6Q9Z2V5 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Hdac6Q9Z2V5 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Hdac6Q9Z2V5 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC26.25■■□□□ 1.79
Hdac6Q9Z2V5 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Hdac6Q9Z2V5 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC26.25■■□□□ 1.79
Hdac6Q9Z2V5 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Hdac6Q9Z2V5 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Hdac6Q9Z2V5 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Hdac6Q9Z2V5 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Hdac6Q9Z2V5 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Hdac6Q9Z2V5 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Hdac6Q9Z2V5 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Hdac6Q9Z2V5 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC26.24■■□□□ 1.79
Hdac6Q9Z2V5 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Hdac6Q9Z2V5 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Hdac6Q9Z2V5 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Hdac6Q9Z2V5 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Hdac6Q9Z2V5 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Hdac6Q9Z2V5 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC26.23■■□□□ 1.79
Hdac6Q9Z2V5 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
Hdac6Q9Z2V5 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Hdac6Q9Z2V5 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC26.23■■□□□ 1.79
Hdac6Q9Z2V5 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC26.23■■□□□ 1.79
Hdac6Q9Z2V5 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Hdac6Q9Z2V5 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Hdac6Q9Z2V5 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Hdac6Q9Z2V5 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC26.22■■□□□ 1.79
Hdac6Q9Z2V5 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
Hdac6Q9Z2V5 Gm27405-201ENSMUST00000184201 112 ntBASIC26.21■■□□□ 1.79
Hdac6Q9Z2V5 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Hdac6Q9Z2V5 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Hdac6Q9Z2V5 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Hdac6Q9Z2V5 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Hdac6Q9Z2V5 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Hdac6Q9Z2V5 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Hdac6Q9Z2V5 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Hdac6Q9Z2V5 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC26.2■■□□□ 1.78
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms