Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Upk1bQ9Z2C6 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.17■□□□□ 0.66
Upk1bQ9Z2C6 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Upk1bQ9Z2C6 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.17■□□□□ 0.66
Upk1bQ9Z2C6 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
Upk1bQ9Z2C6 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Upk1bQ9Z2C6 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Upk1bQ9Z2C6 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Upk1bQ9Z2C6 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Upk1bQ9Z2C6 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.16■□□□□ 0.66
Upk1bQ9Z2C6 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Upk1bQ9Z2C6 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.16■□□□□ 0.66
Upk1bQ9Z2C6 Scarna2-201ENSMUST00000157560 414 ntBASIC19.16■□□□□ 0.66
Upk1bQ9Z2C6 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Upk1bQ9Z2C6 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Upk1bQ9Z2C6 Gm9806-201ENSMUST00000051080 552 ntBASIC19.16■□□□□ 0.66
Upk1bQ9Z2C6 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Upk1bQ9Z2C6 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Upk1bQ9Z2C6 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Upk1bQ9Z2C6 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Upk1bQ9Z2C6 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Upk1bQ9Z2C6 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Upk1bQ9Z2C6 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.15■□□□□ 0.66
Upk1bQ9Z2C6 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Upk1bQ9Z2C6 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Upk1bQ9Z2C6 Gm16437-201ENSMUST00000025669 507 ntBASIC19.15■□□□□ 0.66
Upk1bQ9Z2C6 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Upk1bQ9Z2C6 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Upk1bQ9Z2C6 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Upk1bQ9Z2C6 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Upk1bQ9Z2C6 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Upk1bQ9Z2C6 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Upk1bQ9Z2C6 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Upk1bQ9Z2C6 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Upk1bQ9Z2C6 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Upk1bQ9Z2C6 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Upk1bQ9Z2C6 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Upk1bQ9Z2C6 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Upk1bQ9Z2C6 Iqck-206ENSMUST00000208658 2891 ntBASIC19.14■□□□□ 0.65
Upk1bQ9Z2C6 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Upk1bQ9Z2C6 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Upk1bQ9Z2C6 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Upk1bQ9Z2C6 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Upk1bQ9Z2C6 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Upk1bQ9Z2C6 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Upk1bQ9Z2C6 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Upk1bQ9Z2C6 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Upk1bQ9Z2C6 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Upk1bQ9Z2C6 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Upk1bQ9Z2C6 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Upk1bQ9Z2C6 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Upk1bQ9Z2C6 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Upk1bQ9Z2C6 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Upk1bQ9Z2C6 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Upk1bQ9Z2C6 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Upk1bQ9Z2C6 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.12■□□□□ 0.65
Upk1bQ9Z2C6 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.12■□□□□ 0.65
Upk1bQ9Z2C6 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Upk1bQ9Z2C6 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Upk1bQ9Z2C6 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Upk1bQ9Z2C6 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Upk1bQ9Z2C6 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Upk1bQ9Z2C6 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Upk1bQ9Z2C6 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Upk1bQ9Z2C6 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Upk1bQ9Z2C6 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
Upk1bQ9Z2C6 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Upk1bQ9Z2C6 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Upk1bQ9Z2C6 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Upk1bQ9Z2C6 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Upk1bQ9Z2C6 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Upk1bQ9Z2C6 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Upk1bQ9Z2C6 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Upk1bQ9Z2C6 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Upk1bQ9Z2C6 Golph3-202ENSMUST00000226517 2359 ntBASIC19.1■□□□□ 0.65
Upk1bQ9Z2C6 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Upk1bQ9Z2C6 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Upk1bQ9Z2C6 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Upk1bQ9Z2C6 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Upk1bQ9Z2C6 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Upk1bQ9Z2C6 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Upk1bQ9Z2C6 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Upk1bQ9Z2C6 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Upk1bQ9Z2C6 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Upk1bQ9Z2C6 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Upk1bQ9Z2C6 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Upk1bQ9Z2C6 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Upk1bQ9Z2C6 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Upk1bQ9Z2C6 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Upk1bQ9Z2C6 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Upk1bQ9Z2C6 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Upk1bQ9Z2C6 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.08■□□□□ 0.65
Upk1bQ9Z2C6 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Upk1bQ9Z2C6 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Upk1bQ9Z2C6 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Upk1bQ9Z2C6 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Upk1bQ9Z2C6 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Upk1bQ9Z2C6 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Upk1bQ9Z2C6 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.07■□□□□ 0.64
Upk1bQ9Z2C6 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms