Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Cldn3Q9Z0G9 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.89■□□□□ 0.93
Cldn3Q9Z0G9 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cldn3Q9Z0G9 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cldn3Q9Z0G9 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Cldn3Q9Z0G9 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cldn3Q9Z0G9 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cldn3Q9Z0G9 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cldn3Q9Z0G9 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Cldn3Q9Z0G9 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.88■□□□□ 0.93
Cldn3Q9Z0G9 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Cldn3Q9Z0G9 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cldn3Q9Z0G9 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cldn3Q9Z0G9 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cldn3Q9Z0G9 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cldn3Q9Z0G9 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Cldn3Q9Z0G9 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.88■□□□□ 0.93
Cldn3Q9Z0G9 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.88■□□□□ 0.93
Cldn3Q9Z0G9 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Cldn3Q9Z0G9 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.88■□□□□ 0.93
Cldn3Q9Z0G9 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cldn3Q9Z0G9 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cldn3Q9Z0G9 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cldn3Q9Z0G9 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cldn3Q9Z0G9 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cldn3Q9Z0G9 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cldn3Q9Z0G9 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cldn3Q9Z0G9 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.87■□□□□ 0.93
Cldn3Q9Z0G9 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cldn3Q9Z0G9 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cldn3Q9Z0G9 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.86■□□□□ 0.93
Cldn3Q9Z0G9 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cldn3Q9Z0G9 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cldn3Q9Z0G9 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cldn3Q9Z0G9 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cldn3Q9Z0G9 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.86■□□□□ 0.93
Cldn3Q9Z0G9 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cldn3Q9Z0G9 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cldn3Q9Z0G9 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cldn3Q9Z0G9 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cldn3Q9Z0G9 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cldn3Q9Z0G9 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.85■□□□□ 0.93
Cldn3Q9Z0G9 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cldn3Q9Z0G9 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cldn3Q9Z0G9 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cldn3Q9Z0G9 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cldn3Q9Z0G9 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cldn3Q9Z0G9 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Cldn3Q9Z0G9 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cldn3Q9Z0G9 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cldn3Q9Z0G9 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cldn3Q9Z0G9 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cldn3Q9Z0G9 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cldn3Q9Z0G9 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Cldn3Q9Z0G9 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cldn3Q9Z0G9 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Cldn3Q9Z0G9 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cldn3Q9Z0G9 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cldn3Q9Z0G9 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cldn3Q9Z0G9 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cldn3Q9Z0G9 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Cldn3Q9Z0G9 Etf1-202ENSMUST00000180351 108 ntBASIC20.84■□□□□ 0.93
Cldn3Q9Z0G9 Gm7417-201ENSMUST00000192950 473 ntBASIC20.84■□□□□ 0.93
Cldn3Q9Z0G9 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Cldn3Q9Z0G9 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cldn3Q9Z0G9 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.83■□□□□ 0.93
Cldn3Q9Z0G9 Gm9959-201ENSMUST00000068277 390 ntBASIC20.83■□□□□ 0.93
Cldn3Q9Z0G9 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cldn3Q9Z0G9 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Cldn3Q9Z0G9 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Cldn3Q9Z0G9 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.82■□□□□ 0.92
Cldn3Q9Z0G9 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cldn3Q9Z0G9 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Cldn3Q9Z0G9 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.82■□□□□ 0.92
Cldn3Q9Z0G9 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Cldn3Q9Z0G9 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cldn3Q9Z0G9 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cldn3Q9Z0G9 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cldn3Q9Z0G9 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cldn3Q9Z0G9 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cldn3Q9Z0G9 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cldn3Q9Z0G9 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cldn3Q9Z0G9 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Cldn3Q9Z0G9 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cldn3Q9Z0G9 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
Cldn3Q9Z0G9 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Cldn3Q9Z0G9 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cldn3Q9Z0G9 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.8■□□□□ 0.92
Cldn3Q9Z0G9 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cldn3Q9Z0G9 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Cldn3Q9Z0G9 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.8■□□□□ 0.92
Cldn3Q9Z0G9 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cldn3Q9Z0G9 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.79■□□□□ 0.92
Cldn3Q9Z0G9 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Cldn3Q9Z0G9 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cldn3Q9Z0G9 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cldn3Q9Z0G9 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.79■□□□□ 0.92
Cldn3Q9Z0G9 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.79■□□□□ 0.92
Cldn3Q9Z0G9 Rps24-207ENSMUST00000224568 714 ntBASIC20.79■□□□□ 0.92
Cldn3Q9Z0G9 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms