Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lhx9Q9WUH2 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
Lhx9Q9WUH2 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lhx9Q9WUH2 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.75■□□□□ 0.75
Lhx9Q9WUH2 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lhx9Q9WUH2 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lhx9Q9WUH2 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lhx9Q9WUH2 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lhx9Q9WUH2 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lhx9Q9WUH2 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Lhx9Q9WUH2 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Lhx9Q9WUH2 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Lhx9Q9WUH2 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Lhx9Q9WUH2 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.74■□□□□ 0.75
Lhx9Q9WUH2 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.74■□□□□ 0.75
Lhx9Q9WUH2 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lhx9Q9WUH2 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.74■□□□□ 0.75
Lhx9Q9WUH2 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lhx9Q9WUH2 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lhx9Q9WUH2 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lhx9Q9WUH2 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Lhx9Q9WUH2 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lhx9Q9WUH2 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.73■□□□□ 0.75
Lhx9Q9WUH2 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.73■□□□□ 0.75
Lhx9Q9WUH2 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lhx9Q9WUH2 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lhx9Q9WUH2 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lhx9Q9WUH2 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lhx9Q9WUH2 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lhx9Q9WUH2 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lhx9Q9WUH2 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Lhx9Q9WUH2 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lhx9Q9WUH2 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lhx9Q9WUH2 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lhx9Q9WUH2 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lhx9Q9WUH2 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Lhx9Q9WUH2 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Lhx9Q9WUH2 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lhx9Q9WUH2 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lhx9Q9WUH2 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.71■□□□□ 0.75
Lhx9Q9WUH2 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lhx9Q9WUH2 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lhx9Q9WUH2 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Lhx9Q9WUH2 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lhx9Q9WUH2 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lhx9Q9WUH2 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.7■□□□□ 0.74
Lhx9Q9WUH2 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lhx9Q9WUH2 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Lhx9Q9WUH2 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lhx9Q9WUH2 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lhx9Q9WUH2 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Lhx9Q9WUH2 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.69■□□□□ 0.74
Lhx9Q9WUH2 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lhx9Q9WUH2 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.69■□□□□ 0.74
Lhx9Q9WUH2 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lhx9Q9WUH2 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Lhx9Q9WUH2 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.69■□□□□ 0.74
Lhx9Q9WUH2 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lhx9Q9WUH2 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lhx9Q9WUH2 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
Lhx9Q9WUH2 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lhx9Q9WUH2 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.68■□□□□ 0.74
Lhx9Q9WUH2 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lhx9Q9WUH2 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.68■□□□□ 0.74
Lhx9Q9WUH2 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.68■□□□□ 0.74
Lhx9Q9WUH2 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.68■□□□□ 0.74
Lhx9Q9WUH2 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lhx9Q9WUH2 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lhx9Q9WUH2 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lhx9Q9WUH2 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Lhx9Q9WUH2 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Lhx9Q9WUH2 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lhx9Q9WUH2 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lhx9Q9WUH2 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.67■□□□□ 0.74
Lhx9Q9WUH2 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.67■□□□□ 0.74
Lhx9Q9WUH2 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lhx9Q9WUH2 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Lhx9Q9WUH2 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.67■□□□□ 0.74
Lhx9Q9WUH2 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Lhx9Q9WUH2 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lhx9Q9WUH2 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lhx9Q9WUH2 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lhx9Q9WUH2 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Lhx9Q9WUH2 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.66■□□□□ 0.74
Lhx9Q9WUH2 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.66■□□□□ 0.74
Lhx9Q9WUH2 Golgb1-201ENSMUST00000023534 498 ntBASIC19.66■□□□□ 0.74
Lhx9Q9WUH2 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lhx9Q9WUH2 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.66■□□□□ 0.74
Lhx9Q9WUH2 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lhx9Q9WUH2 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lhx9Q9WUH2 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lhx9Q9WUH2 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Lhx9Q9WUH2 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Lhx9Q9WUH2 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lhx9Q9WUH2 Gm12821-201ENSMUST00000120022 600 ntBASIC19.64■□□□□ 0.73
Lhx9Q9WUH2 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.64■□□□□ 0.73
Lhx9Q9WUH2 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lhx9Q9WUH2 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lhx9Q9WUH2 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lhx9Q9WUH2 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms