Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.54■□□□□ 0.4
Col13a1Q9R1N9 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col13a1Q9R1N9 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col13a1Q9R1N9 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col13a1Q9R1N9 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Col13a1Q9R1N9 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Col13a1Q9R1N9 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col13a1Q9R1N9 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col13a1Q9R1N9 Gm27011-201ENSMUST00000182352 972 ntBASIC17.53■□□□□ 0.4
Col13a1Q9R1N9 Gm8493-201ENSMUST00000196881 489 ntBASIC17.53■□□□□ 0.4
Col13a1Q9R1N9 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.53■□□□□ 0.4
Col13a1Q9R1N9 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col13a1Q9R1N9 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col13a1Q9R1N9 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Col13a1Q9R1N9 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col13a1Q9R1N9 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col13a1Q9R1N9 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.52■□□□□ 0.4
Col13a1Q9R1N9 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
Col13a1Q9R1N9 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col13a1Q9R1N9 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col13a1Q9R1N9 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Col13a1Q9R1N9 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Col13a1Q9R1N9 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col13a1Q9R1N9 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC17.52■□□□□ 0.39
Col13a1Q9R1N9 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC17.52■□□□□ 0.39
Col13a1Q9R1N9 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Col13a1Q9R1N9 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col13a1Q9R1N9 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col13a1Q9R1N9 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col13a1Q9R1N9 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col13a1Q9R1N9 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17.51■□□□□ 0.39
Col13a1Q9R1N9 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col13a1Q9R1N9 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col13a1Q9R1N9 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
Col13a1Q9R1N9 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col13a1Q9R1N9 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col13a1Q9R1N9 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Col13a1Q9R1N9 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Col13a1Q9R1N9 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Col13a1Q9R1N9 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col13a1Q9R1N9 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col13a1Q9R1N9 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col13a1Q9R1N9 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Col13a1Q9R1N9 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Col13a1Q9R1N9 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.5■□□□□ 0.39
Col13a1Q9R1N9 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Col13a1Q9R1N9 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col13a1Q9R1N9 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Col13a1Q9R1N9 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Col13a1Q9R1N9 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col13a1Q9R1N9 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Col13a1Q9R1N9 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col13a1Q9R1N9 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col13a1Q9R1N9 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Col13a1Q9R1N9 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col13a1Q9R1N9 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Col13a1Q9R1N9 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Col13a1Q9R1N9 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Col13a1Q9R1N9 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col13a1Q9R1N9 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
Col13a1Q9R1N9 Gm26571-201ENSMUST00000181399 666 ntBASIC17.49■□□□□ 0.39
Col13a1Q9R1N9 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.49■□□□□ 0.39
Col13a1Q9R1N9 Gm42569-201ENSMUST00000200539 472 ntBASIC17.49■□□□□ 0.39
Col13a1Q9R1N9 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
Col13a1Q9R1N9 AC117245.4-201ENSMUST00000217388 1646 ntBASIC17.48■□□□□ 0.39
Col13a1Q9R1N9 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col13a1Q9R1N9 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Col13a1Q9R1N9 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col13a1Q9R1N9 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.48■□□□□ 0.39
Col13a1Q9R1N9 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Col13a1Q9R1N9 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Col13a1Q9R1N9 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Col13a1Q9R1N9 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.48■□□□□ 0.39
Col13a1Q9R1N9 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Col13a1Q9R1N9 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Col13a1Q9R1N9 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col13a1Q9R1N9 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col13a1Q9R1N9 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col13a1Q9R1N9 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Col13a1Q9R1N9 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col13a1Q9R1N9 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col13a1Q9R1N9 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col13a1Q9R1N9 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Col13a1Q9R1N9 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col13a1Q9R1N9 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Col13a1Q9R1N9 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col13a1Q9R1N9 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Col13a1Q9R1N9 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Col13a1Q9R1N9 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col13a1Q9R1N9 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col13a1Q9R1N9 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col13a1Q9R1N9 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col13a1Q9R1N9 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.46■□□□□ 0.39
Col13a1Q9R1N9 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.46■□□□□ 0.39
Col13a1Q9R1N9 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col13a1Q9R1N9 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col13a1Q9R1N9 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Col13a1Q9R1N9 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col13a1Q9R1N9 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Col13a1Q9R1N9 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms