Protein–RNA interactions for Protein: Q9R061

Nubp2, Cytosolic Fe-S cluster assembly factor NUBP2, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp2Q9R061 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nubp2Q9R061 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.22■□□□□ 0.51
Nubp2Q9R061 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
Nubp2Q9R061 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nubp2Q9R061 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Nubp2Q9R061 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Nubp2Q9R061 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nubp2Q9R061 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Nubp2Q9R061 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nubp2Q9R061 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nubp2Q9R061 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nubp2Q9R061 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.21■□□□□ 0.51
Nubp2Q9R061 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.21■□□□□ 0.51
Nubp2Q9R061 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nubp2Q9R061 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.21■□□□□ 0.51
Nubp2Q9R061 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nubp2Q9R061 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nubp2Q9R061 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nubp2Q9R061 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nubp2Q9R061 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nubp2Q9R061 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Nubp2Q9R061 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nubp2Q9R061 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Nubp2Q9R061 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nubp2Q9R061 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nubp2Q9R061 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Nubp2Q9R061 Etf1-202ENSMUST00000180351 108 ntBASIC18.19■□□□□ 0.5
Nubp2Q9R061 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Nubp2Q9R061 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Nubp2Q9R061 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nubp2Q9R061 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nubp2Q9R061 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Nubp2Q9R061 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.18■□□□□ 0.5
Nubp2Q9R061 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nubp2Q9R061 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.18■□□□□ 0.5
Nubp2Q9R061 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.18■□□□□ 0.5
Nubp2Q9R061 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nubp2Q9R061 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.18■□□□□ 0.5
Nubp2Q9R061 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
Nubp2Q9R061 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Nubp2Q9R061 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nubp2Q9R061 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nubp2Q9R061 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nubp2Q9R061 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nubp2Q9R061 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nubp2Q9R061 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nubp2Q9R061 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nubp2Q9R061 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nubp2Q9R061 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Nubp2Q9R061 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nubp2Q9R061 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nubp2Q9R061 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.17■□□□□ 0.5
Nubp2Q9R061 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nubp2Q9R061 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Nubp2Q9R061 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nubp2Q9R061 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.16■□□□□ 0.5
Nubp2Q9R061 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nubp2Q9R061 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.16■□□□□ 0.5
Nubp2Q9R061 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.16■□□□□ 0.5
Nubp2Q9R061 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nubp2Q9R061 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nubp2Q9R061 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Nubp2Q9R061 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Nubp2Q9R061 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nubp2Q9R061 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nubp2Q9R061 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nubp2Q9R061 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nubp2Q9R061 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.15■□□□□ 0.5
Nubp2Q9R061 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nubp2Q9R061 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nubp2Q9R061 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nubp2Q9R061 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nubp2Q9R061 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
Nubp2Q9R061 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nubp2Q9R061 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nubp2Q9R061 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Nubp2Q9R061 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nubp2Q9R061 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.14■□□□□ 0.49
Nubp2Q9R061 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.14■□□□□ 0.49
Nubp2Q9R061 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Nubp2Q9R061 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nubp2Q9R061 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
Nubp2Q9R061 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nubp2Q9R061 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nubp2Q9R061 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Nubp2Q9R061 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nubp2Q9R061 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nubp2Q9R061 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nubp2Q9R061 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Nubp2Q9R061 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nubp2Q9R061 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
Nubp2Q9R061 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.12■□□□□ 0.49
Nubp2Q9R061 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.12■□□□□ 0.49
Nubp2Q9R061 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.12■□□□□ 0.49
Nubp2Q9R061 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Nubp2Q9R061 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nubp2Q9R061 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.12■□□□□ 0.49
Nubp2Q9R061 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nubp2Q9R061 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nubp2Q9R061 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms