Protein–RNA interactions for Protein: Q9QZ88

Vps29, Vacuolar protein sorting-associated protein 29, mousemouse

Predictions only

Length 182 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps29Q9QZ88 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Vps29Q9QZ88 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Vps29Q9QZ88 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Vps29Q9QZ88 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Vps29Q9QZ88 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vps29Q9QZ88 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vps29Q9QZ88 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vps29Q9QZ88 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Vps29Q9QZ88 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Vps29Q9QZ88 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vps29Q9QZ88 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vps29Q9QZ88 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vps29Q9QZ88 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.8■□□□□ 0.76
Vps29Q9QZ88 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Vps29Q9QZ88 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vps29Q9QZ88 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vps29Q9QZ88 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vps29Q9QZ88 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vps29Q9QZ88 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vps29Q9QZ88 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vps29Q9QZ88 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Vps29Q9QZ88 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Vps29Q9QZ88 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vps29Q9QZ88 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Vps29Q9QZ88 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.78■□□□□ 0.76
Vps29Q9QZ88 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Vps29Q9QZ88 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vps29Q9QZ88 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vps29Q9QZ88 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.77■□□□□ 0.76
Vps29Q9QZ88 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Vps29Q9QZ88 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vps29Q9QZ88 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vps29Q9QZ88 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.77■□□□□ 0.76
Vps29Q9QZ88 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vps29Q9QZ88 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Vps29Q9QZ88 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vps29Q9QZ88 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Vps29Q9QZ88 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vps29Q9QZ88 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Vps29Q9QZ88 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vps29Q9QZ88 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Vps29Q9QZ88 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vps29Q9QZ88 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.76■□□□□ 0.75
Vps29Q9QZ88 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vps29Q9QZ88 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vps29Q9QZ88 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vps29Q9QZ88 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vps29Q9QZ88 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Vps29Q9QZ88 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vps29Q9QZ88 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vps29Q9QZ88 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vps29Q9QZ88 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Vps29Q9QZ88 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vps29Q9QZ88 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vps29Q9QZ88 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vps29Q9QZ88 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vps29Q9QZ88 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vps29Q9QZ88 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Vps29Q9QZ88 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.74■□□□□ 0.75
Vps29Q9QZ88 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vps29Q9QZ88 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vps29Q9QZ88 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Vps29Q9QZ88 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Vps29Q9QZ88 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vps29Q9QZ88 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vps29Q9QZ88 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.73■□□□□ 0.75
Vps29Q9QZ88 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.73■□□□□ 0.75
Vps29Q9QZ88 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vps29Q9QZ88 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.73■□□□□ 0.75
Vps29Q9QZ88 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vps29Q9QZ88 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Vps29Q9QZ88 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vps29Q9QZ88 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.73■□□□□ 0.75
Vps29Q9QZ88 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Vps29Q9QZ88 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vps29Q9QZ88 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.72■□□□□ 0.75
Vps29Q9QZ88 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vps29Q9QZ88 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Vps29Q9QZ88 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vps29Q9QZ88 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vps29Q9QZ88 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vps29Q9QZ88 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.72■□□□□ 0.75
Vps29Q9QZ88 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vps29Q9QZ88 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Vps29Q9QZ88 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
Vps29Q9QZ88 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vps29Q9QZ88 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vps29Q9QZ88 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.71■□□□□ 0.75
Vps29Q9QZ88 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vps29Q9QZ88 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vps29Q9QZ88 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.7■□□□□ 0.74
Vps29Q9QZ88 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Vps29Q9QZ88 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vps29Q9QZ88 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vps29Q9QZ88 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vps29Q9QZ88 Gm10232-201ENSMUST00000089221 720 ntBASIC19.7■□□□□ 0.74
Vps29Q9QZ88 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Vps29Q9QZ88 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vps29Q9QZ88 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vps29Q9QZ88 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms