Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Msh5Q9QUM7 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.96■□□□□ 0.95
Msh5Q9QUM7 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Msh5Q9QUM7 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Msh5Q9QUM7 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
Msh5Q9QUM7 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Msh5Q9QUM7 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Msh5Q9QUM7 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
Msh5Q9QUM7 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.95■□□□□ 0.94
Msh5Q9QUM7 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Msh5Q9QUM7 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
Msh5Q9QUM7 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Msh5Q9QUM7 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Msh5Q9QUM7 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Msh5Q9QUM7 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.94■□□□□ 0.94
Msh5Q9QUM7 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Msh5Q9QUM7 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Msh5Q9QUM7 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.93■□□□□ 0.94
Msh5Q9QUM7 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Msh5Q9QUM7 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Msh5Q9QUM7 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Msh5Q9QUM7 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Msh5Q9QUM7 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Msh5Q9QUM7 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Msh5Q9QUM7 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.92■□□□□ 0.94
Msh5Q9QUM7 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Msh5Q9QUM7 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Msh5Q9QUM7 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.92■□□□□ 0.94
Msh5Q9QUM7 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Msh5Q9QUM7 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Msh5Q9QUM7 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Msh5Q9QUM7 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.91■□□□□ 0.94
Msh5Q9QUM7 Gm43566-201ENSMUST00000196851 808 ntBASIC20.91■□□□□ 0.94
Msh5Q9QUM7 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Msh5Q9QUM7 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Msh5Q9QUM7 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Msh5Q9QUM7 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.9■□□□□ 0.94
Msh5Q9QUM7 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Msh5Q9QUM7 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Msh5Q9QUM7 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Msh5Q9QUM7 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Msh5Q9QUM7 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Msh5Q9QUM7 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Msh5Q9QUM7 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
Msh5Q9QUM7 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Msh5Q9QUM7 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Msh5Q9QUM7 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Msh5Q9QUM7 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.89■□□□□ 0.93
Msh5Q9QUM7 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.89■□□□□ 0.93
Msh5Q9QUM7 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Msh5Q9QUM7 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.89■□□□□ 0.93
Msh5Q9QUM7 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Msh5Q9QUM7 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Msh5Q9QUM7 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Msh5Q9QUM7 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.88■□□□□ 0.93
Msh5Q9QUM7 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
Msh5Q9QUM7 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Msh5Q9QUM7 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Msh5Q9QUM7 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Msh5Q9QUM7 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Msh5Q9QUM7 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Msh5Q9QUM7 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.87■□□□□ 0.93
Msh5Q9QUM7 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Msh5Q9QUM7 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Msh5Q9QUM7 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Msh5Q9QUM7 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Msh5Q9QUM7 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
Msh5Q9QUM7 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.87■□□□□ 0.93
Msh5Q9QUM7 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Msh5Q9QUM7 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Msh5Q9QUM7 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Msh5Q9QUM7 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Msh5Q9QUM7 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Msh5Q9QUM7 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Msh5Q9QUM7 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Msh5Q9QUM7 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Msh5Q9QUM7 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Msh5Q9QUM7 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Msh5Q9QUM7 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Msh5Q9QUM7 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Msh5Q9QUM7 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Msh5Q9QUM7 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Msh5Q9QUM7 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Msh5Q9QUM7 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Msh5Q9QUM7 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Msh5Q9QUM7 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Msh5Q9QUM7 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Msh5Q9QUM7 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Msh5Q9QUM7 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Msh5Q9QUM7 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Msh5Q9QUM7 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Msh5Q9QUM7 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Msh5Q9QUM7 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Msh5Q9QUM7 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Msh5Q9QUM7 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Msh5Q9QUM7 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Msh5Q9QUM7 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Msh5Q9QUM7 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Msh5Q9QUM7 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Msh5Q9QUM7 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 136.3 ms