Protein–RNA interactions for Protein: Q9JM73

Srf, Serum response factor, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SrfQ9JM73 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SrfQ9JM73 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.71■□□□□ 0.75
SrfQ9JM73 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SrfQ9JM73 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SrfQ9JM73 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SrfQ9JM73 Gm43060-201ENSMUST00000200621 289 ntBASIC19.7■□□□□ 0.74
SrfQ9JM73 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
SrfQ9JM73 Gm10493-201ENSMUST00000097270 612 ntBASIC19.7■□□□□ 0.74
SrfQ9JM73 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SrfQ9JM73 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SrfQ9JM73 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SrfQ9JM73 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SrfQ9JM73 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.69■□□□□ 0.74
SrfQ9JM73 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SrfQ9JM73 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SrfQ9JM73 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SrfQ9JM73 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
SrfQ9JM73 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
SrfQ9JM73 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
SrfQ9JM73 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SrfQ9JM73 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SrfQ9JM73 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SrfQ9JM73 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SrfQ9JM73 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.68■□□□□ 0.74
SrfQ9JM73 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SrfQ9JM73 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
SrfQ9JM73 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SrfQ9JM73 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SrfQ9JM73 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.67■□□□□ 0.74
SrfQ9JM73 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.67■□□□□ 0.74
SrfQ9JM73 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SrfQ9JM73 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SrfQ9JM73 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SrfQ9JM73 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.66■□□□□ 0.74
SrfQ9JM73 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SrfQ9JM73 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SrfQ9JM73 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SrfQ9JM73 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.66■□□□□ 0.74
SrfQ9JM73 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
SrfQ9JM73 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SrfQ9JM73 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.65■□□□□ 0.74
SrfQ9JM73 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SrfQ9JM73 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
SrfQ9JM73 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
SrfQ9JM73 Gm7291-201ENSMUST00000199147 382 ntBASIC19.65■□□□□ 0.74
SrfQ9JM73 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SrfQ9JM73 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SrfQ9JM73 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SrfQ9JM73 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
SrfQ9JM73 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SrfQ9JM73 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SrfQ9JM73 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.64■□□□□ 0.73
SrfQ9JM73 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SrfQ9JM73 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SrfQ9JM73 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.64■□□□□ 0.73
SrfQ9JM73 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SrfQ9JM73 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SrfQ9JM73 Gm29257-201ENSMUST00000186115 639 ntBASIC19.63■□□□□ 0.73
SrfQ9JM73 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SrfQ9JM73 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SrfQ9JM73 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SrfQ9JM73 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SrfQ9JM73 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.62■□□□□ 0.73
SrfQ9JM73 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.62■□□□□ 0.73
SrfQ9JM73 Spcs1-207ENSMUST00000228767 1008 ntBASIC19.62■□□□□ 0.73
SrfQ9JM73 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SrfQ9JM73 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SrfQ9JM73 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SrfQ9JM73 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SrfQ9JM73 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SrfQ9JM73 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SrfQ9JM73 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
SrfQ9JM73 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SrfQ9JM73 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.61■□□□□ 0.73
SrfQ9JM73 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SrfQ9JM73 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.61■□□□□ 0.73
SrfQ9JM73 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SrfQ9JM73 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SrfQ9JM73 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SrfQ9JM73 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SrfQ9JM73 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SrfQ9JM73 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.6■□□□□ 0.73
SrfQ9JM73 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SrfQ9JM73 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SrfQ9JM73 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.6■□□□□ 0.73
SrfQ9JM73 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SrfQ9JM73 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SrfQ9JM73 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.59■□□□□ 0.73
SrfQ9JM73 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SrfQ9JM73 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.59■□□□□ 0.73
SrfQ9JM73 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SrfQ9JM73 Gm27405-201ENSMUST00000184201 112 ntBASIC19.59■□□□□ 0.73
SrfQ9JM73 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.59■□□□□ 0.73
SrfQ9JM73 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.59■□□□□ 0.73
SrfQ9JM73 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SrfQ9JM73 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SrfQ9JM73 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SrfQ9JM73 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SrfQ9JM73 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SrfQ9JM73 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms