Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Rfx5Q9JL61 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rfx5Q9JL61 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
Rfx5Q9JL61 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
Rfx5Q9JL61 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
Rfx5Q9JL61 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC22.01■■□□□ 1.11
Rfx5Q9JL61 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Rfx5Q9JL61 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Rfx5Q9JL61 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Rfx5Q9JL61 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
Rfx5Q9JL61 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC22■■□□□ 1.11
Rfx5Q9JL61 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Rfx5Q9JL61 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Rfx5Q9JL61 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC22■■□□□ 1.11
Rfx5Q9JL61 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Rfx5Q9JL61 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Rfx5Q9JL61 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Rfx5Q9JL61 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Rfx5Q9JL61 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Rfx5Q9JL61 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.99■■□□□ 1.11
Rfx5Q9JL61 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Rfx5Q9JL61 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Rfx5Q9JL61 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Rfx5Q9JL61 Gm5913-201ENSMUST00000119397 1399 ntBASIC21.99■■□□□ 1.11
Rfx5Q9JL61 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rfx5Q9JL61 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rfx5Q9JL61 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rfx5Q9JL61 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.98■■□□□ 1.11
Rfx5Q9JL61 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Rfx5Q9JL61 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rfx5Q9JL61 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Rfx5Q9JL61 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Rfx5Q9JL61 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Rfx5Q9JL61 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Rfx5Q9JL61 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Rfx5Q9JL61 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC21.97■■□□□ 1.11
Rfx5Q9JL61 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC21.97■■□□□ 1.11
Rfx5Q9JL61 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Rfx5Q9JL61 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.96■■□□□ 1.11
Rfx5Q9JL61 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rfx5Q9JL61 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rfx5Q9JL61 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Rfx5Q9JL61 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Rfx5Q9JL61 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Rfx5Q9JL61 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Rfx5Q9JL61 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Rfx5Q9JL61 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Rfx5Q9JL61 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rfx5Q9JL61 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rfx5Q9JL61 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC21.94■■□□□ 1.1
Rfx5Q9JL61 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rfx5Q9JL61 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21.94■■□□□ 1.1
Rfx5Q9JL61 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Rfx5Q9JL61 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.93■■□□□ 1.1
Rfx5Q9JL61 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Rfx5Q9JL61 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.93■■□□□ 1.1
Rfx5Q9JL61 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Rfx5Q9JL61 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Rfx5Q9JL61 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Rfx5Q9JL61 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Rfx5Q9JL61 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Rfx5Q9JL61 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Rfx5Q9JL61 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Rfx5Q9JL61 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.92■■□□□ 1.1
Rfx5Q9JL61 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Rfx5Q9JL61 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Rfx5Q9JL61 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Rfx5Q9JL61 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Rfx5Q9JL61 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Rfx5Q9JL61 Gm7143-201ENSMUST00000222811 859 ntBASIC21.92■■□□□ 1.1
Rfx5Q9JL61 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.92■■□□□ 1.1
Rfx5Q9JL61 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Rfx5Q9JL61 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rfx5Q9JL61 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rfx5Q9JL61 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC21.91■■□□□ 1.1
Rfx5Q9JL61 Gm9870-201ENSMUST00000063874 645 ntBASIC21.91■■□□□ 1.1
Rfx5Q9JL61 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.91■■□□□ 1.1
Rfx5Q9JL61 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rfx5Q9JL61 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rfx5Q9JL61 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rfx5Q9JL61 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rfx5Q9JL61 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.9■■□□□ 1.1
Rfx5Q9JL61 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Rfx5Q9JL61 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rfx5Q9JL61 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC21.9■■□□□ 1.1
Rfx5Q9JL61 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
Rfx5Q9JL61 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC21.89■■□□□ 1.1
Rfx5Q9JL61 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Rfx5Q9JL61 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC21.89■■□□□ 1.09
Rfx5Q9JL61 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
Rfx5Q9JL61 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.89■■□□□ 1.09
Rfx5Q9JL61 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC21.88■■□□□ 1.09
Rfx5Q9JL61 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.88■■□□□ 1.09
Rfx5Q9JL61 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rfx5Q9JL61 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Rfx5Q9JL61 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rfx5Q9JL61 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Rfx5Q9JL61 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Rfx5Q9JL61 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.87■■□□□ 1.09
Rfx5Q9JL61 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms