Protein–RNA interactions for Protein: Q9JJR9

Nrip3, Nuclear receptor-interacting protein 3, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nrip3Q9JJR9 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nrip3Q9JJR9 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nrip3Q9JJR9 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nrip3Q9JJR9 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nrip3Q9JJR9 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Nrip3Q9JJR9 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nrip3Q9JJR9 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Nrip3Q9JJR9 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nrip3Q9JJR9 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Nrip3Q9JJR9 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Nrip3Q9JJR9 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nrip3Q9JJR9 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nrip3Q9JJR9 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nrip3Q9JJR9 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nrip3Q9JJR9 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.68■□□□□ 0.58
Nrip3Q9JJR9 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Nrip3Q9JJR9 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.68■□□□□ 0.58
Nrip3Q9JJR9 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nrip3Q9JJR9 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nrip3Q9JJR9 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nrip3Q9JJR9 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nrip3Q9JJR9 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.68■□□□□ 0.58
Nrip3Q9JJR9 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Nrip3Q9JJR9 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nrip3Q9JJR9 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.67■□□□□ 0.58
Nrip3Q9JJR9 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nrip3Q9JJR9 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nrip3Q9JJR9 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.67■□□□□ 0.58
Nrip3Q9JJR9 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.67■□□□□ 0.58
Nrip3Q9JJR9 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nrip3Q9JJR9 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nrip3Q9JJR9 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nrip3Q9JJR9 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nrip3Q9JJR9 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Nrip3Q9JJR9 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nrip3Q9JJR9 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nrip3Q9JJR9 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC18.66■□□□□ 0.58
Nrip3Q9JJR9 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nrip3Q9JJR9 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nrip3Q9JJR9 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC18.66■□□□□ 0.58
Nrip3Q9JJR9 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Nrip3Q9JJR9 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nrip3Q9JJR9 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Nrip3Q9JJR9 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Nrip3Q9JJR9 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nrip3Q9JJR9 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Nrip3Q9JJR9 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nrip3Q9JJR9 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nrip3Q9JJR9 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.65■□□□□ 0.58
Nrip3Q9JJR9 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nrip3Q9JJR9 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nrip3Q9JJR9 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nrip3Q9JJR9 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nrip3Q9JJR9 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nrip3Q9JJR9 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nrip3Q9JJR9 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nrip3Q9JJR9 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nrip3Q9JJR9 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nrip3Q9JJR9 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nrip3Q9JJR9 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.64■□□□□ 0.57
Nrip3Q9JJR9 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nrip3Q9JJR9 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nrip3Q9JJR9 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nrip3Q9JJR9 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Nrip3Q9JJR9 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nrip3Q9JJR9 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nrip3Q9JJR9 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Nrip3Q9JJR9 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nrip3Q9JJR9 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nrip3Q9JJR9 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nrip3Q9JJR9 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Nrip3Q9JJR9 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nrip3Q9JJR9 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nrip3Q9JJR9 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nrip3Q9JJR9 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nrip3Q9JJR9 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Nrip3Q9JJR9 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Nrip3Q9JJR9 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nrip3Q9JJR9 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nrip3Q9JJR9 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nrip3Q9JJR9 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nrip3Q9JJR9 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Nrip3Q9JJR9 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.61■□□□□ 0.57
Nrip3Q9JJR9 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nrip3Q9JJR9 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nrip3Q9JJR9 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nrip3Q9JJR9 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC18.61■□□□□ 0.57
Nrip3Q9JJR9 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
Nrip3Q9JJR9 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.61■□□□□ 0.57
Nrip3Q9JJR9 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nrip3Q9JJR9 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.61■□□□□ 0.57
Nrip3Q9JJR9 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nrip3Q9JJR9 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Nrip3Q9JJR9 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nrip3Q9JJR9 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nrip3Q9JJR9 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.6■□□□□ 0.57
Nrip3Q9JJR9 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Nrip3Q9JJR9 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Nrip3Q9JJR9 Gm27502-201ENSMUST00000183495 199 ntBASIC18.6■□□□□ 0.57
Nrip3Q9JJR9 Mir6538-201ENSMUST00000183713 110 ntBASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms