Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rrp8Q9DB85 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rrp8Q9DB85 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rrp8Q9DB85 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rrp8Q9DB85 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rrp8Q9DB85 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Rrp8Q9DB85 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Rrp8Q9DB85 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rrp8Q9DB85 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rrp8Q9DB85 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rrp8Q9DB85 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rrp8Q9DB85 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rrp8Q9DB85 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Rrp8Q9DB85 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rrp8Q9DB85 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Rrp8Q9DB85 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Rrp8Q9DB85 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rrp8Q9DB85 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.29■□□□□ 0.84
Rrp8Q9DB85 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rrp8Q9DB85 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rrp8Q9DB85 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rrp8Q9DB85 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Rrp8Q9DB85 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rrp8Q9DB85 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rrp8Q9DB85 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
Rrp8Q9DB85 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rrp8Q9DB85 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rrp8Q9DB85 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rrp8Q9DB85 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.28■□□□□ 0.84
Rrp8Q9DB85 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rrp8Q9DB85 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.28■□□□□ 0.84
Rrp8Q9DB85 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Rrp8Q9DB85 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Rrp8Q9DB85 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rrp8Q9DB85 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rrp8Q9DB85 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rrp8Q9DB85 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rrp8Q9DB85 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rrp8Q9DB85 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.27■□□□□ 0.84
Rrp8Q9DB85 Gm5874-201ENSMUST00000096101 508 ntBASIC20.27■□□□□ 0.84
Rrp8Q9DB85 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Rrp8Q9DB85 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rrp8Q9DB85 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Rrp8Q9DB85 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rrp8Q9DB85 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rrp8Q9DB85 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rrp8Q9DB85 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rrp8Q9DB85 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rrp8Q9DB85 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rrp8Q9DB85 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rrp8Q9DB85 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rrp8Q9DB85 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rrp8Q9DB85 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rrp8Q9DB85 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rrp8Q9DB85 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Rrp8Q9DB85 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.24■□□□□ 0.83
Rrp8Q9DB85 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rrp8Q9DB85 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.24■□□□□ 0.83
Rrp8Q9DB85 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rrp8Q9DB85 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Rrp8Q9DB85 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rrp8Q9DB85 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.23■□□□□ 0.83
Rrp8Q9DB85 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rrp8Q9DB85 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.23■□□□□ 0.83
Rrp8Q9DB85 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rrp8Q9DB85 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rrp8Q9DB85 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rrp8Q9DB85 Gm43173-201ENSMUST00000202246 593 ntBASIC20.23■□□□□ 0.83
Rrp8Q9DB85 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Rrp8Q9DB85 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rrp8Q9DB85 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rrp8Q9DB85 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Rrp8Q9DB85 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rrp8Q9DB85 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Rrp8Q9DB85 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Rrp8Q9DB85 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rrp8Q9DB85 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rrp8Q9DB85 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.22■□□□□ 0.83
Rrp8Q9DB85 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rrp8Q9DB85 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rrp8Q9DB85 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rrp8Q9DB85 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rrp8Q9DB85 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rrp8Q9DB85 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.21■□□□□ 0.83
Rrp8Q9DB85 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rrp8Q9DB85 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rrp8Q9DB85 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Rrp8Q9DB85 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rrp8Q9DB85 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.21■□□□□ 0.83
Rrp8Q9DB85 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Rrp8Q9DB85 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rrp8Q9DB85 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rrp8Q9DB85 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rrp8Q9DB85 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rrp8Q9DB85 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rrp8Q9DB85 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Rrp8Q9DB85 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.2■□□□□ 0.82
Rrp8Q9DB85 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rrp8Q9DB85 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rrp8Q9DB85 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms