Protein–RNA interactions for Protein: Q9DA19

Cir1, Corepressor interacting with RBPJ 1, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cir1Q9DA19 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cir1Q9DA19 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
Cir1Q9DA19 Gm28731-201ENSMUST00000185564 1569 ntBASIC17.77■□□□□ 0.44
Cir1Q9DA19 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cir1Q9DA19 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC17.77■□□□□ 0.43
Cir1Q9DA19 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Cir1Q9DA19 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cir1Q9DA19 Golph3-202ENSMUST00000226517 2359 ntBASIC17.76■□□□□ 0.43
Cir1Q9DA19 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Cir1Q9DA19 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cir1Q9DA19 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cir1Q9DA19 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cir1Q9DA19 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cir1Q9DA19 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Cir1Q9DA19 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cir1Q9DA19 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cir1Q9DA19 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cir1Q9DA19 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cir1Q9DA19 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cir1Q9DA19 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cir1Q9DA19 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cir1Q9DA19 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cir1Q9DA19 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cir1Q9DA19 Gm44428-201ENSMUST00000204474 874 ntBASIC17.75■□□□□ 0.43
Cir1Q9DA19 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Cir1Q9DA19 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cir1Q9DA19 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cir1Q9DA19 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cir1Q9DA19 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cir1Q9DA19 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cir1Q9DA19 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Cir1Q9DA19 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cir1Q9DA19 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cir1Q9DA19 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Cir1Q9DA19 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cir1Q9DA19 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cir1Q9DA19 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cir1Q9DA19 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cir1Q9DA19 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cir1Q9DA19 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cir1Q9DA19 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cir1Q9DA19 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cir1Q9DA19 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cir1Q9DA19 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cir1Q9DA19 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cir1Q9DA19 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Cir1Q9DA19 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Cir1Q9DA19 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cir1Q9DA19 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cir1Q9DA19 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Cir1Q9DA19 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cir1Q9DA19 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cir1Q9DA19 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC17.72■□□□□ 0.43
Cir1Q9DA19 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cir1Q9DA19 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
Cir1Q9DA19 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cir1Q9DA19 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cir1Q9DA19 Gm5522-201ENSMUST00000189483 1242 ntBASIC17.71■□□□□ 0.43
Cir1Q9DA19 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cir1Q9DA19 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Cir1Q9DA19 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Cir1Q9DA19 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cir1Q9DA19 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cir1Q9DA19 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Cir1Q9DA19 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Cir1Q9DA19 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cir1Q9DA19 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Cir1Q9DA19 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cir1Q9DA19 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cir1Q9DA19 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Cir1Q9DA19 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cir1Q9DA19 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cir1Q9DA19 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cir1Q9DA19 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cir1Q9DA19 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cir1Q9DA19 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC17.69■□□□□ 0.42
Cir1Q9DA19 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cir1Q9DA19 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC17.69■□□□□ 0.42
Cir1Q9DA19 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cir1Q9DA19 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cir1Q9DA19 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cir1Q9DA19 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cir1Q9DA19 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC17.68■□□□□ 0.42
Cir1Q9DA19 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.68■□□□□ 0.42
Cir1Q9DA19 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Cir1Q9DA19 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cir1Q9DA19 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cir1Q9DA19 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
Cir1Q9DA19 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cir1Q9DA19 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cir1Q9DA19 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC17.68■□□□□ 0.42
Cir1Q9DA19 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cir1Q9DA19 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cir1Q9DA19 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cir1Q9DA19 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cir1Q9DA19 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cir1Q9DA19 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cir1Q9DA19 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cir1Q9DA19 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Cir1Q9DA19 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 139.7 ms