Protein–RNA interactions for Protein: Q9D9Q6

Calr3, Calreticulin-3, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Calr3Q9D9Q6 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Calr3Q9D9Q6 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.31■■□□□ 1
Calr3Q9D9Q6 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21.31■■□□□ 1
Calr3Q9D9Q6 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.31■■□□□ 1
Calr3Q9D9Q6 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.31■■□□□ 1
Calr3Q9D9Q6 Gm45364-201ENSMUST00000210883 159 ntBASIC21.31■■□□□ 1
Calr3Q9D9Q6 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Calr3Q9D9Q6 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.31■■□□□ 1
Calr3Q9D9Q6 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC21.31■■□□□ 1
Calr3Q9D9Q6 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC21.31■■□□□ 1
Calr3Q9D9Q6 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC21.31■■□□□ 1
Calr3Q9D9Q6 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Calr3Q9D9Q6 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Calr3Q9D9Q6 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Calr3Q9D9Q6 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Calr3Q9D9Q6 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Calr3Q9D9Q6 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Calr3Q9D9Q6 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC21.3■■□□□ 1
Calr3Q9D9Q6 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC21.3■■□□□ 1
Calr3Q9D9Q6 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Calr3Q9D9Q6 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Calr3Q9D9Q6 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Calr3Q9D9Q6 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Calr3Q9D9Q6 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Calr3Q9D9Q6 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Calr3Q9D9Q6 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Calr3Q9D9Q6 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC21.29■■□□□ 1
Calr3Q9D9Q6 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.29■■□□□ 1
Calr3Q9D9Q6 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Calr3Q9D9Q6 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Calr3Q9D9Q6 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Calr3Q9D9Q6 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.28■■□□□ 1
Calr3Q9D9Q6 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
Calr3Q9D9Q6 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Calr3Q9D9Q6 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Calr3Q9D9Q6 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Calr3Q9D9Q6 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Calr3Q9D9Q6 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Calr3Q9D9Q6 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Calr3Q9D9Q6 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC21.28■■□□□ 1
Calr3Q9D9Q6 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Calr3Q9D9Q6 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Calr3Q9D9Q6 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Calr3Q9D9Q6 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Calr3Q9D9Q6 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Calr3Q9D9Q6 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.27■■□□□ 1
Calr3Q9D9Q6 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC21.27■■□□□ 1
Calr3Q9D9Q6 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC21.27■□□□□ 0.99
Calr3Q9D9Q6 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Calr3Q9D9Q6 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Calr3Q9D9Q6 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Calr3Q9D9Q6 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Calr3Q9D9Q6 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Calr3Q9D9Q6 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Calr3Q9D9Q6 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Calr3Q9D9Q6 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Calr3Q9D9Q6 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Calr3Q9D9Q6 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Calr3Q9D9Q6 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Calr3Q9D9Q6 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Calr3Q9D9Q6 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Calr3Q9D9Q6 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Calr3Q9D9Q6 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Calr3Q9D9Q6 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Calr3Q9D9Q6 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Calr3Q9D9Q6 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Calr3Q9D9Q6 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Calr3Q9D9Q6 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Calr3Q9D9Q6 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Calr3Q9D9Q6 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.24■□□□□ 0.99
Calr3Q9D9Q6 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC21.24■□□□□ 0.99
Calr3Q9D9Q6 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Calr3Q9D9Q6 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.24■□□□□ 0.99
Calr3Q9D9Q6 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Calr3Q9D9Q6 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC21.24■□□□□ 0.99
Calr3Q9D9Q6 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Calr3Q9D9Q6 AC122428.2-201ENSMUST00000216321 1832 ntBASIC21.24■□□□□ 0.99
Calr3Q9D9Q6 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC21.23■□□□□ 0.99
Calr3Q9D9Q6 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Calr3Q9D9Q6 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Calr3Q9D9Q6 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Calr3Q9D9Q6 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Calr3Q9D9Q6 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Calr3Q9D9Q6 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Calr3Q9D9Q6 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Calr3Q9D9Q6 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Calr3Q9D9Q6 Gm44428-201ENSMUST00000204474 874 ntBASIC21.22■□□□□ 0.99
Calr3Q9D9Q6 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Calr3Q9D9Q6 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Calr3Q9D9Q6 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Calr3Q9D9Q6 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC21.21■□□□□ 0.99
Calr3Q9D9Q6 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Calr3Q9D9Q6 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.21■□□□□ 0.99
Calr3Q9D9Q6 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC21.21■□□□□ 0.99
Calr3Q9D9Q6 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Calr3Q9D9Q6 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.2■□□□□ 0.99
Calr3Q9D9Q6 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
Calr3Q9D9Q6 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Calr3Q9D9Q6 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC21.2■□□□□ 0.98
Calr3Q9D9Q6 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms