Protein–RNA interactions for Protein: Q9D361

Snrnp48, U11/U12 small nuclear ribonucleoprotein 48 kDa protein, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp48Q9D361 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Snrnp48Q9D361 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Snrnp48Q9D361 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Snrnp48Q9D361 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Snrnp48Q9D361 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Snrnp48Q9D361 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Snrnp48Q9D361 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Snrnp48Q9D361 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.64■□□□□ 0.89
Snrnp48Q9D361 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Snrnp48Q9D361 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Snrnp48Q9D361 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Snrnp48Q9D361 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Snrnp48Q9D361 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Snrnp48Q9D361 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Snrnp48Q9D361 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
Snrnp48Q9D361 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Snrnp48Q9D361 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Snrnp48Q9D361 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.63■□□□□ 0.89
Snrnp48Q9D361 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Snrnp48Q9D361 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Snrnp48Q9D361 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.63■□□□□ 0.89
Snrnp48Q9D361 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Snrnp48Q9D361 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Snrnp48Q9D361 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Snrnp48Q9D361 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Snrnp48Q9D361 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Snrnp48Q9D361 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Snrnp48Q9D361 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Snrnp48Q9D361 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Snrnp48Q9D361 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Snrnp48Q9D361 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Snrnp48Q9D361 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Snrnp48Q9D361 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Snrnp48Q9D361 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Snrnp48Q9D361 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Snrnp48Q9D361 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Snrnp48Q9D361 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Snrnp48Q9D361 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Snrnp48Q9D361 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.61■□□□□ 0.89
Snrnp48Q9D361 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Snrnp48Q9D361 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Snrnp48Q9D361 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Snrnp48Q9D361 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Snrnp48Q9D361 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Snrnp48Q9D361 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Snrnp48Q9D361 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.6■□□□□ 0.89
Snrnp48Q9D361 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Snrnp48Q9D361 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Snrnp48Q9D361 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Snrnp48Q9D361 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Snrnp48Q9D361 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Snrnp48Q9D361 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Snrnp48Q9D361 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Snrnp48Q9D361 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Snrnp48Q9D361 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.59■□□□□ 0.89
Snrnp48Q9D361 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Snrnp48Q9D361 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Snrnp48Q9D361 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Snrnp48Q9D361 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Snrnp48Q9D361 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Snrnp48Q9D361 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Snrnp48Q9D361 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.58■□□□□ 0.88
Snrnp48Q9D361 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Snrnp48Q9D361 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Snrnp48Q9D361 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Snrnp48Q9D361 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
Snrnp48Q9D361 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Snrnp48Q9D361 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Snrnp48Q9D361 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.57■□□□□ 0.88
Snrnp48Q9D361 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Snrnp48Q9D361 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Snrnp48Q9D361 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Snrnp48Q9D361 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Snrnp48Q9D361 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Snrnp48Q9D361 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Snrnp48Q9D361 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Snrnp48Q9D361 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.55■□□□□ 0.88
Snrnp48Q9D361 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Snrnp48Q9D361 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.55■□□□□ 0.88
Snrnp48Q9D361 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.55■□□□□ 0.88
Snrnp48Q9D361 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.55■□□□□ 0.88
Snrnp48Q9D361 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Snrnp48Q9D361 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Snrnp48Q9D361 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Snrnp48Q9D361 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.55■□□□□ 0.88
Snrnp48Q9D361 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.55■□□□□ 0.88
Snrnp48Q9D361 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.54■□□□□ 0.88
Snrnp48Q9D361 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Snrnp48Q9D361 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Snrnp48Q9D361 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.54■□□□□ 0.88
Snrnp48Q9D361 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Snrnp48Q9D361 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.54■□□□□ 0.88
Snrnp48Q9D361 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Snrnp48Q9D361 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Snrnp48Q9D361 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Snrnp48Q9D361 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Snrnp48Q9D361 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.53■□□□□ 0.88
Snrnp48Q9D361 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Snrnp48Q9D361 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.53■□□□□ 0.88
Snrnp48Q9D361 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms