Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Shmt2Q9CZN7 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Shmt2Q9CZN7 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Shmt2Q9CZN7 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Shmt2Q9CZN7 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.67■□□□□ 0.74
Shmt2Q9CZN7 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Shmt2Q9CZN7 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Shmt2Q9CZN7 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Shmt2Q9CZN7 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Shmt2Q9CZN7 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Shmt2Q9CZN7 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Shmt2Q9CZN7 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Shmt2Q9CZN7 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Shmt2Q9CZN7 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Shmt2Q9CZN7 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Shmt2Q9CZN7 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Shmt2Q9CZN7 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.66■□□□□ 0.74
Shmt2Q9CZN7 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.66■□□□□ 0.74
Shmt2Q9CZN7 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Shmt2Q9CZN7 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Shmt2Q9CZN7 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Shmt2Q9CZN7 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Shmt2Q9CZN7 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Shmt2Q9CZN7 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.65■□□□□ 0.74
Shmt2Q9CZN7 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Shmt2Q9CZN7 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Shmt2Q9CZN7 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Shmt2Q9CZN7 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.65■□□□□ 0.74
Shmt2Q9CZN7 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Shmt2Q9CZN7 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.65■□□□□ 0.74
Shmt2Q9CZN7 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Shmt2Q9CZN7 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Shmt2Q9CZN7 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Shmt2Q9CZN7 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Shmt2Q9CZN7 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.64■□□□□ 0.73
Shmt2Q9CZN7 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Shmt2Q9CZN7 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Shmt2Q9CZN7 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Shmt2Q9CZN7 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Shmt2Q9CZN7 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Shmt2Q9CZN7 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Shmt2Q9CZN7 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
Shmt2Q9CZN7 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Shmt2Q9CZN7 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Shmt2Q9CZN7 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Shmt2Q9CZN7 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Shmt2Q9CZN7 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.63■□□□□ 0.73
Shmt2Q9CZN7 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Shmt2Q9CZN7 Golph3-202ENSMUST00000226517 2359 ntBASIC19.63■□□□□ 0.73
Shmt2Q9CZN7 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Shmt2Q9CZN7 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.63■□□□□ 0.73
Shmt2Q9CZN7 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Shmt2Q9CZN7 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Shmt2Q9CZN7 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Shmt2Q9CZN7 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Shmt2Q9CZN7 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.62■□□□□ 0.73
Shmt2Q9CZN7 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Shmt2Q9CZN7 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.62■□□□□ 0.73
Shmt2Q9CZN7 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Shmt2Q9CZN7 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Shmt2Q9CZN7 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Shmt2Q9CZN7 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Shmt2Q9CZN7 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Shmt2Q9CZN7 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Shmt2Q9CZN7 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Shmt2Q9CZN7 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Shmt2Q9CZN7 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Shmt2Q9CZN7 Gm15546-201ENSMUST00000122095 826 ntBASIC19.61■□□□□ 0.73
Shmt2Q9CZN7 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.61■□□□□ 0.73
Shmt2Q9CZN7 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.61■□□□□ 0.73
Shmt2Q9CZN7 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
Shmt2Q9CZN7 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Shmt2Q9CZN7 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Shmt2Q9CZN7 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.6■□□□□ 0.73
Shmt2Q9CZN7 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Shmt2Q9CZN7 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Shmt2Q9CZN7 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Shmt2Q9CZN7 Gm10232-201ENSMUST00000089221 720 ntBASIC19.6■□□□□ 0.73
Shmt2Q9CZN7 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Shmt2Q9CZN7 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Shmt2Q9CZN7 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Shmt2Q9CZN7 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Shmt2Q9CZN7 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
Shmt2Q9CZN7 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Shmt2Q9CZN7 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Shmt2Q9CZN7 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.59■□□□□ 0.73
Shmt2Q9CZN7 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Shmt2Q9CZN7 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Shmt2Q9CZN7 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.59■□□□□ 0.73
Shmt2Q9CZN7 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.59■□□□□ 0.73
Shmt2Q9CZN7 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Shmt2Q9CZN7 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Shmt2Q9CZN7 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Shmt2Q9CZN7 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Shmt2Q9CZN7 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Shmt2Q9CZN7 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Shmt2Q9CZN7 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.58■□□□□ 0.72
Shmt2Q9CZN7 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.58■□□□□ 0.72
Shmt2Q9CZN7 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Shmt2Q9CZN7 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms