Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lrrc40Q9CRC8 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lrrc40Q9CRC8 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Lrrc40Q9CRC8 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lrrc40Q9CRC8 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lrrc40Q9CRC8 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lrrc40Q9CRC8 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Lrrc40Q9CRC8 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lrrc40Q9CRC8 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lrrc40Q9CRC8 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lrrc40Q9CRC8 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lrrc40Q9CRC8 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Lrrc40Q9CRC8 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Lrrc40Q9CRC8 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lrrc40Q9CRC8 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lrrc40Q9CRC8 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lrrc40Q9CRC8 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lrrc40Q9CRC8 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lrrc40Q9CRC8 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Lrrc40Q9CRC8 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lrrc40Q9CRC8 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.55■□□□□ 0.88
Lrrc40Q9CRC8 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lrrc40Q9CRC8 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.55■□□□□ 0.88
Lrrc40Q9CRC8 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lrrc40Q9CRC8 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lrrc40Q9CRC8 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lrrc40Q9CRC8 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lrrc40Q9CRC8 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lrrc40Q9CRC8 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.54■□□□□ 0.88
Lrrc40Q9CRC8 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lrrc40Q9CRC8 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lrrc40Q9CRC8 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lrrc40Q9CRC8 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lrrc40Q9CRC8 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lrrc40Q9CRC8 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lrrc40Q9CRC8 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.53■□□□□ 0.88
Lrrc40Q9CRC8 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lrrc40Q9CRC8 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lrrc40Q9CRC8 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lrrc40Q9CRC8 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.52■□□□□ 0.88
Lrrc40Q9CRC8 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lrrc40Q9CRC8 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Lrrc40Q9CRC8 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lrrc40Q9CRC8 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.51■□□□□ 0.87
Lrrc40Q9CRC8 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lrrc40Q9CRC8 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lrrc40Q9CRC8 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.51■□□□□ 0.87
Lrrc40Q9CRC8 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lrrc40Q9CRC8 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lrrc40Q9CRC8 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Lrrc40Q9CRC8 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lrrc40Q9CRC8 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lrrc40Q9CRC8 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lrrc40Q9CRC8 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lrrc40Q9CRC8 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Lrrc40Q9CRC8 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lrrc40Q9CRC8 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.49■□□□□ 0.87
Lrrc40Q9CRC8 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lrrc40Q9CRC8 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.49■□□□□ 0.87
Lrrc40Q9CRC8 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lrrc40Q9CRC8 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lrrc40Q9CRC8 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lrrc40Q9CRC8 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Lrrc40Q9CRC8 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.49■□□□□ 0.87
Lrrc40Q9CRC8 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lrrc40Q9CRC8 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lrrc40Q9CRC8 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lrrc40Q9CRC8 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Lrrc40Q9CRC8 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Lrrc40Q9CRC8 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.48■□□□□ 0.87
Lrrc40Q9CRC8 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lrrc40Q9CRC8 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lrrc40Q9CRC8 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lrrc40Q9CRC8 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lrrc40Q9CRC8 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lrrc40Q9CRC8 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Lrrc40Q9CRC8 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lrrc40Q9CRC8 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Lrrc40Q9CRC8 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Lrrc40Q9CRC8 Gm10399-202ENSMUST00000202768 748 ntBASIC20.47■□□□□ 0.87
Lrrc40Q9CRC8 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Lrrc40Q9CRC8 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lrrc40Q9CRC8 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lrrc40Q9CRC8 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lrrc40Q9CRC8 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lrrc40Q9CRC8 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Lrrc40Q9CRC8 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.46■□□□□ 0.87
Lrrc40Q9CRC8 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lrrc40Q9CRC8 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lrrc40Q9CRC8 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lrrc40Q9CRC8 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lrrc40Q9CRC8 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Lrrc40Q9CRC8 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lrrc40Q9CRC8 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lrrc40Q9CRC8 Gm10232-201ENSMUST00000089221 720 ntBASIC20.45■□□□□ 0.86
Lrrc40Q9CRC8 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Lrrc40Q9CRC8 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lrrc40Q9CRC8 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lrrc40Q9CRC8 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lrrc40Q9CRC8 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms