Protein–RNA interactions for Protein: Q9CR56

Nkiras2, NF-kappa-B inhibitor-interacting Ras-like protein 2, mousemouse

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkiras2Q9CR56 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nkiras2Q9CR56 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Nkiras2Q9CR56 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nkiras2Q9CR56 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.46■□□□□ 0.55
Nkiras2Q9CR56 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nkiras2Q9CR56 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nkiras2Q9CR56 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Nkiras2Q9CR56 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC18.46■□□□□ 0.55
Nkiras2Q9CR56 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Nkiras2Q9CR56 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC18.46■□□□□ 0.55
Nkiras2Q9CR56 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nkiras2Q9CR56 Gm5921-201ENSMUST00000075898 882 ntBASIC18.46■□□□□ 0.55
Nkiras2Q9CR56 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nkiras2Q9CR56 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Nkiras2Q9CR56 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.46■□□□□ 0.55
Nkiras2Q9CR56 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nkiras2Q9CR56 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Nkiras2Q9CR56 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Nkiras2Q9CR56 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Nkiras2Q9CR56 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Nkiras2Q9CR56 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nkiras2Q9CR56 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nkiras2Q9CR56 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nkiras2Q9CR56 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nkiras2Q9CR56 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nkiras2Q9CR56 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.45■□□□□ 0.54
Nkiras2Q9CR56 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Nkiras2Q9CR56 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Nkiras2Q9CR56 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nkiras2Q9CR56 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nkiras2Q9CR56 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nkiras2Q9CR56 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Nkiras2Q9CR56 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Nkiras2Q9CR56 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Nkiras2Q9CR56 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nkiras2Q9CR56 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nkiras2Q9CR56 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.44■□□□□ 0.54
Nkiras2Q9CR56 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Nkiras2Q9CR56 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.44■□□□□ 0.54
Nkiras2Q9CR56 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nkiras2Q9CR56 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nkiras2Q9CR56 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Nkiras2Q9CR56 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nkiras2Q9CR56 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Nkiras2Q9CR56 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Nkiras2Q9CR56 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nkiras2Q9CR56 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Nkiras2Q9CR56 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nkiras2Q9CR56 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nkiras2Q9CR56 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nkiras2Q9CR56 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nkiras2Q9CR56 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nkiras2Q9CR56 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Nkiras2Q9CR56 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.42■□□□□ 0.54
Nkiras2Q9CR56 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nkiras2Q9CR56 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Nkiras2Q9CR56 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nkiras2Q9CR56 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
Nkiras2Q9CR56 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nkiras2Q9CR56 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Nkiras2Q9CR56 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.41■□□□□ 0.54
Nkiras2Q9CR56 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Nkiras2Q9CR56 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.41■□□□□ 0.54
Nkiras2Q9CR56 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nkiras2Q9CR56 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nkiras2Q9CR56 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nkiras2Q9CR56 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Nkiras2Q9CR56 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nkiras2Q9CR56 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nkiras2Q9CR56 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nkiras2Q9CR56 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nkiras2Q9CR56 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nkiras2Q9CR56 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
Nkiras2Q9CR56 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nkiras2Q9CR56 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Nkiras2Q9CR56 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Nkiras2Q9CR56 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nkiras2Q9CR56 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nkiras2Q9CR56 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Nkiras2Q9CR56 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.4■□□□□ 0.54
Nkiras2Q9CR56 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nkiras2Q9CR56 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Nkiras2Q9CR56 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.39■□□□□ 0.54
Nkiras2Q9CR56 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
Nkiras2Q9CR56 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.39■□□□□ 0.53
Nkiras2Q9CR56 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.39■□□□□ 0.53
Nkiras2Q9CR56 Gm45444-201ENSMUST00000211394 898 ntBASIC18.39■□□□□ 0.53
Nkiras2Q9CR56 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.39■□□□□ 0.53
Nkiras2Q9CR56 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nkiras2Q9CR56 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.39■□□□□ 0.53
Nkiras2Q9CR56 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nkiras2Q9CR56 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nkiras2Q9CR56 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Nkiras2Q9CR56 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Nkiras2Q9CR56 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.39■□□□□ 0.53
Nkiras2Q9CR56 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Nkiras2Q9CR56 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Nkiras2Q9CR56 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nkiras2Q9CR56 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Nkiras2Q9CR56 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms