Protein–RNA interactions for Protein: Q9CPU1

Ssxb1, MCG116417, mousemouse

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssxb1Q9CPU1 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ssxb1Q9CPU1 Gm11175-201ENSMUST00000116172 543 ntBASIC20.23■□□□□ 0.83
Ssxb1Q9CPU1 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ssxb1Q9CPU1 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ssxb1Q9CPU1 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Ssxb1Q9CPU1 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ssxb1Q9CPU1 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ssxb1Q9CPU1 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ssxb1Q9CPU1 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ssxb1Q9CPU1 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ssxb1Q9CPU1 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Ssxb1Q9CPU1 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ssxb1Q9CPU1 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ssxb1Q9CPU1 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ssxb1Q9CPU1 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ssxb1Q9CPU1 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Ssxb1Q9CPU1 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ssxb1Q9CPU1 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ssxb1Q9CPU1 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ssxb1Q9CPU1 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ssxb1Q9CPU1 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ssxb1Q9CPU1 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ssxb1Q9CPU1 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ssxb1Q9CPU1 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
Ssxb1Q9CPU1 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.2■□□□□ 0.82
Ssxb1Q9CPU1 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ssxb1Q9CPU1 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ssxb1Q9CPU1 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ssxb1Q9CPU1 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.19■□□□□ 0.82
Ssxb1Q9CPU1 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ssxb1Q9CPU1 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ssxb1Q9CPU1 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ssxb1Q9CPU1 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ssxb1Q9CPU1 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ssxb1Q9CPU1 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ssxb1Q9CPU1 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ssxb1Q9CPU1 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ssxb1Q9CPU1 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ssxb1Q9CPU1 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Ssxb1Q9CPU1 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ssxb1Q9CPU1 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ssxb1Q9CPU1 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ssxb1Q9CPU1 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ssxb1Q9CPU1 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ssxb1Q9CPU1 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.18■□□□□ 0.82
Ssxb1Q9CPU1 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ssxb1Q9CPU1 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ssxb1Q9CPU1 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ssxb1Q9CPU1 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.18■□□□□ 0.82
Ssxb1Q9CPU1 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ssxb1Q9CPU1 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ssxb1Q9CPU1 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ssxb1Q9CPU1 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ssxb1Q9CPU1 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ssxb1Q9CPU1 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ssxb1Q9CPU1 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ssxb1Q9CPU1 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ssxb1Q9CPU1 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ssxb1Q9CPU1 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ssxb1Q9CPU1 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ssxb1Q9CPU1 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ssxb1Q9CPU1 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.16■□□□□ 0.82
Ssxb1Q9CPU1 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ssxb1Q9CPU1 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ssxb1Q9CPU1 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ssxb1Q9CPU1 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.16■□□□□ 0.82
Ssxb1Q9CPU1 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ssxb1Q9CPU1 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ssxb1Q9CPU1 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ssxb1Q9CPU1 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ssxb1Q9CPU1 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Ssxb1Q9CPU1 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ssxb1Q9CPU1 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ssxb1Q9CPU1 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ssxb1Q9CPU1 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Ssxb1Q9CPU1 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Ssxb1Q9CPU1 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ssxb1Q9CPU1 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ssxb1Q9CPU1 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ssxb1Q9CPU1 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ssxb1Q9CPU1 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ssxb1Q9CPU1 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Ssxb1Q9CPU1 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Ssxb1Q9CPU1 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Ssxb1Q9CPU1 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ssxb1Q9CPU1 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ssxb1Q9CPU1 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ssxb1Q9CPU1 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Ssxb1Q9CPU1 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ssxb1Q9CPU1 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ssxb1Q9CPU1 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ssxb1Q9CPU1 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ssxb1Q9CPU1 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Ssxb1Q9CPU1 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ssxb1Q9CPU1 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ssxb1Q9CPU1 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ssxb1Q9CPU1 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.13■□□□□ 0.81
Ssxb1Q9CPU1 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Ssxb1Q9CPU1 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Ssxb1Q9CPU1 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 94.3 ms