Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Col25a1Q99MQ5 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC21.56■■□□□ 1.04
Col25a1Q99MQ5 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Col25a1Q99MQ5 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.56■■□□□ 1.04
Col25a1Q99MQ5 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC21.55■■□□□ 1.04
Col25a1Q99MQ5 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC21.55■■□□□ 1.04
Col25a1Q99MQ5 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Col25a1Q99MQ5 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC21.55■■□□□ 1.04
Col25a1Q99MQ5 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col25a1Q99MQ5 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Col25a1Q99MQ5 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Col25a1Q99MQ5 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col25a1Q99MQ5 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col25a1Q99MQ5 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col25a1Q99MQ5 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col25a1Q99MQ5 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Col25a1Q99MQ5 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC21.54■■□□□ 1.04
Col25a1Q99MQ5 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.54■■□□□ 1.04
Col25a1Q99MQ5 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC21.54■■□□□ 1.04
Col25a1Q99MQ5 Gm7143-201ENSMUST00000222811 859 ntBASIC21.54■■□□□ 1.04
Col25a1Q99MQ5 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Col25a1Q99MQ5 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Col25a1Q99MQ5 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC21.54■■□□□ 1.04
Col25a1Q99MQ5 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col25a1Q99MQ5 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col25a1Q99MQ5 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col25a1Q99MQ5 Gm12441-201ENSMUST00000121806 588 ntBASIC21.53■■□□□ 1.04
Col25a1Q99MQ5 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Col25a1Q99MQ5 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Col25a1Q99MQ5 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC21.53■■□□□ 1.04
Col25a1Q99MQ5 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC21.53■■□□□ 1.04
Col25a1Q99MQ5 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col25a1Q99MQ5 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Col25a1Q99MQ5 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Col25a1Q99MQ5 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC21.52■■□□□ 1.04
Col25a1Q99MQ5 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC21.52■■□□□ 1.04
Col25a1Q99MQ5 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Col25a1Q99MQ5 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Col25a1Q99MQ5 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Col25a1Q99MQ5 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Col25a1Q99MQ5 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Col25a1Q99MQ5 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Col25a1Q99MQ5 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Col25a1Q99MQ5 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Col25a1Q99MQ5 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.51■■□□□ 1.03
Col25a1Q99MQ5 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.51■■□□□ 1.03
Col25a1Q99MQ5 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Col25a1Q99MQ5 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Col25a1Q99MQ5 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.5■■□□□ 1.03
Col25a1Q99MQ5 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Col25a1Q99MQ5 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Col25a1Q99MQ5 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Col25a1Q99MQ5 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Col25a1Q99MQ5 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Col25a1Q99MQ5 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Col25a1Q99MQ5 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Col25a1Q99MQ5 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Col25a1Q99MQ5 Gm20760-201ENSMUST00000179197 648 ntBASIC21.49■■□□□ 1.03
Col25a1Q99MQ5 Gm9870-201ENSMUST00000063874 645 ntBASIC21.49■■□□□ 1.03
Col25a1Q99MQ5 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Col25a1Q99MQ5 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Col25a1Q99MQ5 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Col25a1Q99MQ5 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Col25a1Q99MQ5 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Col25a1Q99MQ5 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Col25a1Q99MQ5 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC21.48■■□□□ 1.03
Col25a1Q99MQ5 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Col25a1Q99MQ5 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Col25a1Q99MQ5 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Col25a1Q99MQ5 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Col25a1Q99MQ5 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Col25a1Q99MQ5 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC21.48■■□□□ 1.03
Col25a1Q99MQ5 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Col25a1Q99MQ5 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Col25a1Q99MQ5 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
Col25a1Q99MQ5 Gm8520-201ENSMUST00000186517 868 ntBASIC21.47■■□□□ 1.03
Col25a1Q99MQ5 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC21.47■■□□□ 1.03
Col25a1Q99MQ5 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC21.47■■□□□ 1.03
Col25a1Q99MQ5 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Col25a1Q99MQ5 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Col25a1Q99MQ5 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Col25a1Q99MQ5 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Col25a1Q99MQ5 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC21.45■■□□□ 1.03
Col25a1Q99MQ5 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Col25a1Q99MQ5 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.45■■□□□ 1.02
Col25a1Q99MQ5 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Col25a1Q99MQ5 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Col25a1Q99MQ5 Mir6982-201ENSMUST00000184354 68 ntBASIC21.45■■□□□ 1.02
Col25a1Q99MQ5 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.45■■□□□ 1.02
Col25a1Q99MQ5 Gm40848-201ENSMUST00000221998 324 ntBASIC21.45■■□□□ 1.02
Col25a1Q99MQ5 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Col25a1Q99MQ5 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Col25a1Q99MQ5 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Col25a1Q99MQ5 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC21.45■■□□□ 1.02
Col25a1Q99MQ5 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
Col25a1Q99MQ5 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Col25a1Q99MQ5 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Col25a1Q99MQ5 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
Col25a1Q99MQ5 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC21.44■■□□□ 1.02
Col25a1Q99MQ5 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms