Protein–RNA interactions for Protein: Q99L48

Nmd3, 60S ribosomal export protein NMD3, mousemouse

Known RBP Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nmd3Q99L48 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nmd3Q99L48 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nmd3Q99L48 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nmd3Q99L48 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Nmd3Q99L48 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nmd3Q99L48 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nmd3Q99L48 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nmd3Q99L48 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.33■□□□□ 0.68
Nmd3Q99L48 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nmd3Q99L48 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nmd3Q99L48 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nmd3Q99L48 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nmd3Q99L48 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nmd3Q99L48 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nmd3Q99L48 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nmd3Q99L48 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nmd3Q99L48 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nmd3Q99L48 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Nmd3Q99L48 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Nmd3Q99L48 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nmd3Q99L48 Gm4799-201ENSMUST00000095396 657 ntBASIC19.31■□□□□ 0.68
Nmd3Q99L48 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Nmd3Q99L48 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nmd3Q99L48 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Nmd3Q99L48 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Nmd3Q99L48 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.3■□□□□ 0.68
Nmd3Q99L48 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nmd3Q99L48 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Nmd3Q99L48 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.3■□□□□ 0.68
Nmd3Q99L48 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Nmd3Q99L48 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.3■□□□□ 0.68
Nmd3Q99L48 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.3■□□□□ 0.68
Nmd3Q99L48 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nmd3Q99L48 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nmd3Q99L48 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nmd3Q99L48 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nmd3Q99L48 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nmd3Q99L48 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nmd3Q99L48 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nmd3Q99L48 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nmd3Q99L48 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nmd3Q99L48 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Nmd3Q99L48 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nmd3Q99L48 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Nmd3Q99L48 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.29■□□□□ 0.68
Nmd3Q99L48 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nmd3Q99L48 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nmd3Q99L48 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nmd3Q99L48 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nmd3Q99L48 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nmd3Q99L48 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.28■□□□□ 0.68
Nmd3Q99L48 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nmd3Q99L48 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Nmd3Q99L48 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nmd3Q99L48 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Nmd3Q99L48 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nmd3Q99L48 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nmd3Q99L48 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nmd3Q99L48 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.27■□□□□ 0.68
Nmd3Q99L48 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
Nmd3Q99L48 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.27■□□□□ 0.67
Nmd3Q99L48 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Nmd3Q99L48 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nmd3Q99L48 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nmd3Q99L48 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Nmd3Q99L48 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Nmd3Q99L48 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Nmd3Q99L48 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nmd3Q99L48 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Nmd3Q99L48 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.26■□□□□ 0.67
Nmd3Q99L48 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nmd3Q99L48 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Nmd3Q99L48 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.26■□□□□ 0.67
Nmd3Q99L48 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.26■□□□□ 0.67
Nmd3Q99L48 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nmd3Q99L48 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Nmd3Q99L48 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Nmd3Q99L48 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Nmd3Q99L48 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nmd3Q99L48 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nmd3Q99L48 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nmd3Q99L48 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nmd3Q99L48 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC19.25■□□□□ 0.67
Nmd3Q99L48 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.25■□□□□ 0.67
Nmd3Q99L48 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nmd3Q99L48 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Nmd3Q99L48 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nmd3Q99L48 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nmd3Q99L48 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Nmd3Q99L48 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nmd3Q99L48 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nmd3Q99L48 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nmd3Q99L48 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nmd3Q99L48 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.24■□□□□ 0.67
Nmd3Q99L48 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Nmd3Q99L48 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.24■□□□□ 0.67
Nmd3Q99L48 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Nmd3Q99L48 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.24■□□□□ 0.67
Nmd3Q99L48 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nmd3Q99L48 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms