Protein–RNA interactions for Protein: Q99246

Cacna1d, Voltage-dependent L-type calcium channel subunit alpha-1D, mousemouse

Predictions only

Length 2,179 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1dQ99246 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.62■□□□□ 0.89
Cacna1dQ99246 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cacna1dQ99246 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cacna1dQ99246 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cacna1dQ99246 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cacna1dQ99246 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Cacna1dQ99246 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cacna1dQ99246 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
Cacna1dQ99246 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cacna1dQ99246 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cacna1dQ99246 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cacna1dQ99246 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.61■□□□□ 0.89
Cacna1dQ99246 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Cacna1dQ99246 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cacna1dQ99246 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cacna1dQ99246 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cacna1dQ99246 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cacna1dQ99246 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cacna1dQ99246 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cacna1dQ99246 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cacna1dQ99246 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cacna1dQ99246 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cacna1dQ99246 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cacna1dQ99246 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
Cacna1dQ99246 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Cacna1dQ99246 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cacna1dQ99246 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cacna1dQ99246 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cacna1dQ99246 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cacna1dQ99246 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cacna1dQ99246 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Cacna1dQ99246 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.58■□□□□ 0.88
Cacna1dQ99246 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Cacna1dQ99246 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Cacna1dQ99246 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cacna1dQ99246 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cacna1dQ99246 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cacna1dQ99246 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cacna1dQ99246 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cacna1dQ99246 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.57■□□□□ 0.88
Cacna1dQ99246 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cacna1dQ99246 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cacna1dQ99246 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cacna1dQ99246 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cacna1dQ99246 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cacna1dQ99246 Gm12251-201ENSMUST00000117893 792 ntBASIC20.56■□□□□ 0.88
Cacna1dQ99246 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cacna1dQ99246 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cacna1dQ99246 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Cacna1dQ99246 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cacna1dQ99246 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cacna1dQ99246 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cacna1dQ99246 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cacna1dQ99246 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cacna1dQ99246 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cacna1dQ99246 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cacna1dQ99246 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cacna1dQ99246 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Cacna1dQ99246 Gm7143-201ENSMUST00000222811 859 ntBASIC20.55■□□□□ 0.88
Cacna1dQ99246 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cacna1dQ99246 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cacna1dQ99246 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cacna1dQ99246 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cacna1dQ99246 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cacna1dQ99246 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cacna1dQ99246 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.54■□□□□ 0.88
Cacna1dQ99246 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cacna1dQ99246 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cacna1dQ99246 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cacna1dQ99246 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.53■□□□□ 0.88
Cacna1dQ99246 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cacna1dQ99246 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.53■□□□□ 0.88
Cacna1dQ99246 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.53■□□□□ 0.88
Cacna1dQ99246 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.53■□□□□ 0.88
Cacna1dQ99246 Mir7075-201ENSMUST00000184187 82 ntBASIC20.53■□□□□ 0.88
Cacna1dQ99246 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Cacna1dQ99246 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cacna1dQ99246 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Cacna1dQ99246 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Cacna1dQ99246 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cacna1dQ99246 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Cacna1dQ99246 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Cacna1dQ99246 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cacna1dQ99246 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cacna1dQ99246 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Cacna1dQ99246 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.52■□□□□ 0.88
Cacna1dQ99246 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.52■□□□□ 0.88
Cacna1dQ99246 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cacna1dQ99246 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
Cacna1dQ99246 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Cacna1dQ99246 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cacna1dQ99246 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cacna1dQ99246 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cacna1dQ99246 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cacna1dQ99246 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Cacna1dQ99246 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cacna1dQ99246 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cacna1dQ99246 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
Cacna1dQ99246 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cacna1dQ99246 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms