Protein–RNA interactions for Protein: Q96EQ9

Prdm9, Histone-lysine N-methyltransferase PRDM9, mousemouse

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm9Q96EQ9 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.39■□□□□ 0.85
Prdm9Q96EQ9 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.39■□□□□ 0.85
Prdm9Q96EQ9 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Prdm9Q96EQ9 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Prdm9Q96EQ9 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Prdm9Q96EQ9 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Prdm9Q96EQ9 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Prdm9Q96EQ9 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Prdm9Q96EQ9 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.38■□□□□ 0.85
Prdm9Q96EQ9 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Prdm9Q96EQ9 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Prdm9Q96EQ9 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Prdm9Q96EQ9 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Prdm9Q96EQ9 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Prdm9Q96EQ9 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
Prdm9Q96EQ9 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Prdm9Q96EQ9 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.37■□□□□ 0.85
Prdm9Q96EQ9 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Prdm9Q96EQ9 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.37■□□□□ 0.85
Prdm9Q96EQ9 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Prdm9Q96EQ9 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Prdm9Q96EQ9 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Prdm9Q96EQ9 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Prdm9Q96EQ9 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Prdm9Q96EQ9 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Prdm9Q96EQ9 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Prdm9Q96EQ9 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Prdm9Q96EQ9 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.37■□□□□ 0.85
Prdm9Q96EQ9 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.36■□□□□ 0.85
Prdm9Q96EQ9 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Prdm9Q96EQ9 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Prdm9Q96EQ9 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Prdm9Q96EQ9 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Prdm9Q96EQ9 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Prdm9Q96EQ9 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.35■□□□□ 0.85
Prdm9Q96EQ9 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Prdm9Q96EQ9 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Prdm9Q96EQ9 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Prdm9Q96EQ9 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Prdm9Q96EQ9 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.34■□□□□ 0.85
Prdm9Q96EQ9 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
Prdm9Q96EQ9 Gm15039-201ENSMUST00000118914 875 ntBASIC20.34■□□□□ 0.85
Prdm9Q96EQ9 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.34■□□□□ 0.85
Prdm9Q96EQ9 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.34■□□□□ 0.85
Prdm9Q96EQ9 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Prdm9Q96EQ9 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Prdm9Q96EQ9 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Prdm9Q96EQ9 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.34■□□□□ 0.85
Prdm9Q96EQ9 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Prdm9Q96EQ9 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Prdm9Q96EQ9 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Prdm9Q96EQ9 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.33■□□□□ 0.85
Prdm9Q96EQ9 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Prdm9Q96EQ9 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Prdm9Q96EQ9 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.33■□□□□ 0.84
Prdm9Q96EQ9 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Prdm9Q96EQ9 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Prdm9Q96EQ9 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.32■□□□□ 0.84
Prdm9Q96EQ9 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Prdm9Q96EQ9 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Prdm9Q96EQ9 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Prdm9Q96EQ9 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.32■□□□□ 0.84
Prdm9Q96EQ9 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Prdm9Q96EQ9 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.32■□□□□ 0.84
Prdm9Q96EQ9 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Prdm9Q96EQ9 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
Prdm9Q96EQ9 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Prdm9Q96EQ9 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
Prdm9Q96EQ9 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Prdm9Q96EQ9 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Prdm9Q96EQ9 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
Prdm9Q96EQ9 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.31■□□□□ 0.84
Prdm9Q96EQ9 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Prdm9Q96EQ9 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Prdm9Q96EQ9 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prdm9Q96EQ9 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prdm9Q96EQ9 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prdm9Q96EQ9 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prdm9Q96EQ9 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prdm9Q96EQ9 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Prdm9Q96EQ9 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Prdm9Q96EQ9 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prdm9Q96EQ9 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
Prdm9Q96EQ9 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prdm9Q96EQ9 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prdm9Q96EQ9 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Prdm9Q96EQ9 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Prdm9Q96EQ9 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Prdm9Q96EQ9 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Prdm9Q96EQ9 Gm12821-201ENSMUST00000120022 600 ntBASIC20.29■□□□□ 0.84
Prdm9Q96EQ9 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Prdm9Q96EQ9 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.29■□□□□ 0.84
Prdm9Q96EQ9 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.29■□□□□ 0.84
Prdm9Q96EQ9 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.29■□□□□ 0.84
Prdm9Q96EQ9 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.29■□□□□ 0.84
Prdm9Q96EQ9 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Prdm9Q96EQ9 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Prdm9Q96EQ9 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Prdm9Q96EQ9 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Prdm9Q96EQ9 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms