Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Smc1bQ920F6 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Smc1bQ920F6 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Smc1bQ920F6 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Smc1bQ920F6 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Smc1bQ920F6 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Smc1bQ920F6 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC23.71■■□□□ 1.39
Smc1bQ920F6 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Smc1bQ920F6 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Smc1bQ920F6 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Smc1bQ920F6 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC23.7■■□□□ 1.38
Smc1bQ920F6 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC23.7■■□□□ 1.38
Smc1bQ920F6 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC23.7■■□□□ 1.38
Smc1bQ920F6 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
Smc1bQ920F6 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC23.7■■□□□ 1.38
Smc1bQ920F6 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Smc1bQ920F6 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC23.7■■□□□ 1.38
Smc1bQ920F6 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Smc1bQ920F6 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Smc1bQ920F6 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Smc1bQ920F6 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC23.69■■□□□ 1.38
Smc1bQ920F6 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Smc1bQ920F6 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC23.69■■□□□ 1.38
Smc1bQ920F6 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Smc1bQ920F6 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
Smc1bQ920F6 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
Smc1bQ920F6 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Smc1bQ920F6 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
Smc1bQ920F6 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Smc1bQ920F6 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Smc1bQ920F6 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Smc1bQ920F6 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC23.68■■□□□ 1.38
Smc1bQ920F6 Gm29257-201ENSMUST00000186115 639 ntBASIC23.68■■□□□ 1.38
Smc1bQ920F6 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC23.68■■□□□ 1.38
Smc1bQ920F6 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
Smc1bQ920F6 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC23.68■■□□□ 1.38
Smc1bQ920F6 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
Smc1bQ920F6 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Smc1bQ920F6 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Smc1bQ920F6 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
Smc1bQ920F6 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
Smc1bQ920F6 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC23.67■■□□□ 1.38
Smc1bQ920F6 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC23.67■■□□□ 1.38
Smc1bQ920F6 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Smc1bQ920F6 Gm6139-201ENSMUST00000079261 882 ntBASIC23.67■■□□□ 1.38
Smc1bQ920F6 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Smc1bQ920F6 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Smc1bQ920F6 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
Smc1bQ920F6 Gm10620-201ENSMUST00000098379 1332 ntBASIC23.66■■□□□ 1.38
Smc1bQ920F6 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC23.66■■□□□ 1.38
Smc1bQ920F6 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC23.66■■□□□ 1.38
Smc1bQ920F6 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Smc1bQ920F6 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Smc1bQ920F6 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Smc1bQ920F6 AC117245.4-201ENSMUST00000217388 1646 ntBASIC23.66■■□□□ 1.38
Smc1bQ920F6 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Smc1bQ920F6 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Smc1bQ920F6 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Smc1bQ920F6 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Smc1bQ920F6 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Smc1bQ920F6 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC23.65■■□□□ 1.38
Smc1bQ920F6 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC23.65■■□□□ 1.38
Smc1bQ920F6 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Smc1bQ920F6 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC23.65■■□□□ 1.38
Smc1bQ920F6 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Smc1bQ920F6 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC23.65■■□□□ 1.38
Smc1bQ920F6 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC23.65■■□□□ 1.38
Smc1bQ920F6 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Smc1bQ920F6 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Smc1bQ920F6 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.38
Smc1bQ920F6 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Smc1bQ920F6 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Smc1bQ920F6 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC23.64■■□□□ 1.37
Smc1bQ920F6 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
Smc1bQ920F6 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
Smc1bQ920F6 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Smc1bQ920F6 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Smc1bQ920F6 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC23.64■■□□□ 1.37
Smc1bQ920F6 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Smc1bQ920F6 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
Smc1bQ920F6 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Smc1bQ920F6 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Smc1bQ920F6 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC23.62■■□□□ 1.37
Smc1bQ920F6 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Smc1bQ920F6 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Smc1bQ920F6 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC23.62■■□□□ 1.37
Smc1bQ920F6 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Smc1bQ920F6 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
Smc1bQ920F6 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Smc1bQ920F6 AC164629.5-201ENSMUST00000220387 632 ntBASIC23.62■■□□□ 1.37
Smc1bQ920F6 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Smc1bQ920F6 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Smc1bQ920F6 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Smc1bQ920F6 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Smc1bQ920F6 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
Smc1bQ920F6 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
Smc1bQ920F6 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC23.61■■□□□ 1.37
Smc1bQ920F6 Gm21168-201ENSMUST00000199646 1096 ntBASIC23.61■■□□□ 1.37
Smc1bQ920F6 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Smc1bQ920F6 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms