Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhb3Q91XZ7 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.48■□□□□ 0.87
Pcdhb3Q91XZ7 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhb3Q91XZ7 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Pcdhb3Q91XZ7 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb3Q91XZ7 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Pcdhb3Q91XZ7 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb3Q91XZ7 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb3Q91XZ7 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.47■□□□□ 0.87
Pcdhb3Q91XZ7 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb3Q91XZ7 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.47■□□□□ 0.87
Pcdhb3Q91XZ7 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.47■□□□□ 0.87
Pcdhb3Q91XZ7 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb3Q91XZ7 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb3Q91XZ7 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Pcdhb3Q91XZ7 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.47■□□□□ 0.87
Pcdhb3Q91XZ7 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb3Q91XZ7 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb3Q91XZ7 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhb3Q91XZ7 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhb3Q91XZ7 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhb3Q91XZ7 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.46■□□□□ 0.87
Pcdhb3Q91XZ7 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.46■□□□□ 0.87
Pcdhb3Q91XZ7 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhb3Q91XZ7 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.46■□□□□ 0.87
Pcdhb3Q91XZ7 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhb3Q91XZ7 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhb3Q91XZ7 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhb3Q91XZ7 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.46■□□□□ 0.87
Pcdhb3Q91XZ7 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
Pcdhb3Q91XZ7 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Pcdhb3Q91XZ7 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhb3Q91XZ7 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb3Q91XZ7 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb3Q91XZ7 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb3Q91XZ7 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Pcdhb3Q91XZ7 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb3Q91XZ7 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb3Q91XZ7 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Pcdhb3Q91XZ7 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb3Q91XZ7 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Pcdhb3Q91XZ7 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb3Q91XZ7 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb3Q91XZ7 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb3Q91XZ7 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb3Q91XZ7 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb3Q91XZ7 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb3Q91XZ7 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.43■□□□□ 0.86
Pcdhb3Q91XZ7 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.43■□□□□ 0.86
Pcdhb3Q91XZ7 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb3Q91XZ7 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb3Q91XZ7 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb3Q91XZ7 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.43■□□□□ 0.86
Pcdhb3Q91XZ7 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.42■□□□□ 0.86
Pcdhb3Q91XZ7 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb3Q91XZ7 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb3Q91XZ7 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb3Q91XZ7 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Pcdhb3Q91XZ7 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb3Q91XZ7 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb3Q91XZ7 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb3Q91XZ7 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb3Q91XZ7 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb3Q91XZ7 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Pcdhb3Q91XZ7 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb3Q91XZ7 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhb3Q91XZ7 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Pcdhb3Q91XZ7 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Pcdhb3Q91XZ7 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhb3Q91XZ7 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.86
Pcdhb3Q91XZ7 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pcdhb3Q91XZ7 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Pcdhb3Q91XZ7 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhb3Q91XZ7 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Pcdhb3Q91XZ7 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhb3Q91XZ7 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Pcdhb3Q91XZ7 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhb3Q91XZ7 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhb3Q91XZ7 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.85
Pcdhb3Q91XZ7 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb3Q91XZ7 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.38■□□□□ 0.85
Pcdhb3Q91XZ7 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb3Q91XZ7 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb3Q91XZ7 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb3Q91XZ7 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb3Q91XZ7 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb3Q91XZ7 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb3Q91XZ7 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb3Q91XZ7 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb3Q91XZ7 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb3Q91XZ7 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb3Q91XZ7 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Pcdhb3Q91XZ7 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Pcdhb3Q91XZ7 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhb3Q91XZ7 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhb3Q91XZ7 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhb3Q91XZ7 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhb3Q91XZ7 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhb3Q91XZ7 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.37■□□□□ 0.85
Pcdhb3Q91XZ7 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms