Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhga6Q91XY2 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhga6Q91XY2 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
Pcdhga6Q91XY2 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhga6Q91XY2 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhga6Q91XY2 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.46■□□□□ 0.87
Pcdhga6Q91XY2 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhga6Q91XY2 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.46■□□□□ 0.87
Pcdhga6Q91XY2 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhga6Q91XY2 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Pcdhga6Q91XY2 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhga6Q91XY2 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Pcdhga6Q91XY2 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhga6Q91XY2 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhga6Q91XY2 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhga6Q91XY2 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhga6Q91XY2 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhga6Q91XY2 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhga6Q91XY2 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhga6Q91XY2 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhga6Q91XY2 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Pcdhga6Q91XY2 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhga6Q91XY2 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhga6Q91XY2 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Pcdhga6Q91XY2 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhga6Q91XY2 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhga6Q91XY2 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhga6Q91XY2 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhga6Q91XY2 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhga6Q91XY2 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhga6Q91XY2 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.42■□□□□ 0.86
Pcdhga6Q91XY2 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.42■□□□□ 0.86
Pcdhga6Q91XY2 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhga6Q91XY2 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Pcdhga6Q91XY2 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Pcdhga6Q91XY2 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.41■□□□□ 0.86
Pcdhga6Q91XY2 Gm8493-201ENSMUST00000196881 489 ntBASIC20.41■□□□□ 0.86
Pcdhga6Q91XY2 Gm7291-201ENSMUST00000199147 382 ntBASIC20.41■□□□□ 0.86
Pcdhga6Q91XY2 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Pcdhga6Q91XY2 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhga6Q91XY2 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhga6Q91XY2 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhga6Q91XY2 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhga6Q91XY2 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhga6Q91XY2 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
Pcdhga6Q91XY2 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.4■□□□□ 0.86
Pcdhga6Q91XY2 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhga6Q91XY2 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhga6Q91XY2 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhga6Q91XY2 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhga6Q91XY2 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Pcdhga6Q91XY2 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Pcdhga6Q91XY2 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhga6Q91XY2 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.39■□□□□ 0.85
Pcdhga6Q91XY2 AC112142.1-201ENSMUST00000228796 918 ntBASIC20.39■□□□□ 0.85
Pcdhga6Q91XY2 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Pcdhga6Q91XY2 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.39■□□□□ 0.85
Pcdhga6Q91XY2 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhga6Q91XY2 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhga6Q91XY2 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhga6Q91XY2 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhga6Q91XY2 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhga6Q91XY2 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.38■□□□□ 0.85
Pcdhga6Q91XY2 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhga6Q91XY2 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.38■□□□□ 0.85
Pcdhga6Q91XY2 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhga6Q91XY2 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhga6Q91XY2 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhga6Q91XY2 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhga6Q91XY2 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhga6Q91XY2 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhga6Q91XY2 Gm9870-201ENSMUST00000063874 645 ntBASIC20.37■□□□□ 0.85
Pcdhga6Q91XY2 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.37■□□□□ 0.85
Pcdhga6Q91XY2 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhga6Q91XY2 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhga6Q91XY2 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhga6Q91XY2 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhga6Q91XY2 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhga6Q91XY2 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhga6Q91XY2 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhga6Q91XY2 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhga6Q91XY2 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.36■□□□□ 0.85
Pcdhga6Q91XY2 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.36■□□□□ 0.85
Pcdhga6Q91XY2 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhga6Q91XY2 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhga6Q91XY2 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhga6Q91XY2 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhga6Q91XY2 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.36■□□□□ 0.85
Pcdhga6Q91XY2 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhga6Q91XY2 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhga6Q91XY2 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Pcdhga6Q91XY2 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.35■□□□□ 0.85
Pcdhga6Q91XY2 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
Pcdhga6Q91XY2 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhga6Q91XY2 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Pcdhga6Q91XY2 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhga6Q91XY2 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhga6Q91XY2 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhga6Q91XY2 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Pcdhga6Q91XY2 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms