Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Trex1Q91XB0 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
Trex1Q91XB0 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Trex1Q91XB0 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC23.9■■□□□ 1.42
Trex1Q91XB0 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Trex1Q91XB0 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Trex1Q91XB0 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
Trex1Q91XB0 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Trex1Q91XB0 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC23.89■■□□□ 1.41
Trex1Q91XB0 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Trex1Q91XB0 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Trex1Q91XB0 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Trex1Q91XB0 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Trex1Q91XB0 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Trex1Q91XB0 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Trex1Q91XB0 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Trex1Q91XB0 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC23.87■■□□□ 1.41
Trex1Q91XB0 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
Trex1Q91XB0 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
Trex1Q91XB0 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC23.87■■□□□ 1.41
Trex1Q91XB0 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Trex1Q91XB0 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
Trex1Q91XB0 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Trex1Q91XB0 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Trex1Q91XB0 Gm43017-201ENSMUST00000198296 752 ntBASIC23.86■■□□□ 1.41
Trex1Q91XB0 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Trex1Q91XB0 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Trex1Q91XB0 Gm42418-201ENSMUST00000182010 1831 ntBASIC23.86■■□□□ 1.41
Trex1Q91XB0 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Trex1Q91XB0 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC23.85■■□□□ 1.41
Trex1Q91XB0 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Trex1Q91XB0 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Trex1Q91XB0 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Trex1Q91XB0 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC23.85■■□□□ 1.41
Trex1Q91XB0 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC23.85■■□□□ 1.41
Trex1Q91XB0 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Trex1Q91XB0 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Trex1Q91XB0 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Trex1Q91XB0 AC164883.3-201ENSMUST00000227396 1774 ntBASIC23.84■■□□□ 1.41
Trex1Q91XB0 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
Trex1Q91XB0 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Trex1Q91XB0 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Trex1Q91XB0 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC23.84■■□□□ 1.41
Trex1Q91XB0 Gm43759-201ENSMUST00000196925 1261 ntBASIC23.84■■□□□ 1.41
Trex1Q91XB0 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Trex1Q91XB0 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Trex1Q91XB0 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
Trex1Q91XB0 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Trex1Q91XB0 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
Trex1Q91XB0 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Trex1Q91XB0 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Trex1Q91XB0 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC23.83■■□□□ 1.41
Trex1Q91XB0 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC23.83■■□□□ 1.41
Trex1Q91XB0 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Trex1Q91XB0 Gm5576-201ENSMUST00000075809 1236 ntBASIC23.83■■□□□ 1.41
Trex1Q91XB0 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Trex1Q91XB0 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Trex1Q91XB0 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC23.82■■□□□ 1.4
Trex1Q91XB0 Gm8493-201ENSMUST00000196881 489 ntBASIC23.82■■□□□ 1.4
Trex1Q91XB0 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Trex1Q91XB0 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC23.81■■□□□ 1.4
Trex1Q91XB0 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC23.81■■□□□ 1.4
Trex1Q91XB0 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Trex1Q91XB0 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC23.81■■□□□ 1.4
Trex1Q91XB0 Gm21168-201ENSMUST00000199646 1096 ntBASIC23.81■■□□□ 1.4
Trex1Q91XB0 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Trex1Q91XB0 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Trex1Q91XB0 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Trex1Q91XB0 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Trex1Q91XB0 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Trex1Q91XB0 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Trex1Q91XB0 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Trex1Q91XB0 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC23.8■■□□□ 1.4
Trex1Q91XB0 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC23.8■■□□□ 1.4
Trex1Q91XB0 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Trex1Q91XB0 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
Trex1Q91XB0 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC23.8■■□□□ 1.4
Trex1Q91XB0 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
Trex1Q91XB0 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Trex1Q91XB0 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Trex1Q91XB0 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Trex1Q91XB0 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
Trex1Q91XB0 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC23.8■■□□□ 1.4
Trex1Q91XB0 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC23.8■■□□□ 1.4
Trex1Q91XB0 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Trex1Q91XB0 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Trex1Q91XB0 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Trex1Q91XB0 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC23.79■■□□□ 1.4
Trex1Q91XB0 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC23.79■■□□□ 1.4
Trex1Q91XB0 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Trex1Q91XB0 Gm43530-201ENSMUST00000195920 274 ntBASIC23.79■■□□□ 1.4
Trex1Q91XB0 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Trex1Q91XB0 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Trex1Q91XB0 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Trex1Q91XB0 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Trex1Q91XB0 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
Trex1Q91XB0 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Trex1Q91XB0 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Trex1Q91XB0 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Trex1Q91XB0 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms