Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cspg4Q8VHY0 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Cspg4Q8VHY0 Gm10033-202ENSMUST00000211874 928 ntBASIC18■□□□□ 0.47
Cspg4Q8VHY0 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Cspg4Q8VHY0 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cspg4Q8VHY0 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cspg4Q8VHY0 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cspg4Q8VHY0 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cspg4Q8VHY0 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cspg4Q8VHY0 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cspg4Q8VHY0 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cspg4Q8VHY0 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cspg4Q8VHY0 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Cspg4Q8VHY0 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cspg4Q8VHY0 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Cspg4Q8VHY0 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cspg4Q8VHY0 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cspg4Q8VHY0 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cspg4Q8VHY0 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.98■□□□□ 0.47
Cspg4Q8VHY0 Gm10602-201ENSMUST00000098239 609 ntBASIC17.98■□□□□ 0.47
Cspg4Q8VHY0 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cspg4Q8VHY0 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.97■□□□□ 0.47
Cspg4Q8VHY0 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cspg4Q8VHY0 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.97■□□□□ 0.47
Cspg4Q8VHY0 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC17.97■□□□□ 0.47
Cspg4Q8VHY0 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.97■□□□□ 0.47
Cspg4Q8VHY0 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cspg4Q8VHY0 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cspg4Q8VHY0 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cspg4Q8VHY0 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cspg4Q8VHY0 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Cspg4Q8VHY0 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cspg4Q8VHY0 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cspg4Q8VHY0 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.97■□□□□ 0.47
Cspg4Q8VHY0 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cspg4Q8VHY0 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cspg4Q8VHY0 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Cspg4Q8VHY0 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.96■□□□□ 0.47
Cspg4Q8VHY0 Gm10252-201ENSMUST00000209541 832 ntBASIC17.96■□□□□ 0.47
Cspg4Q8VHY0 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.96■□□□□ 0.47
Cspg4Q8VHY0 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cspg4Q8VHY0 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC17.96■□□□□ 0.47
Cspg4Q8VHY0 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cspg4Q8VHY0 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.95■□□□□ 0.46
Cspg4Q8VHY0 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cspg4Q8VHY0 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.95■□□□□ 0.46
Cspg4Q8VHY0 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cspg4Q8VHY0 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cspg4Q8VHY0 AC153890.1-201ENSMUST00000220021 2469 ntBASIC17.95■□□□□ 0.46
Cspg4Q8VHY0 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.95■□□□□ 0.46
Cspg4Q8VHY0 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cspg4Q8VHY0 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cspg4Q8VHY0 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cspg4Q8VHY0 Gm4430-201ENSMUST00000192413 1943 ntBASIC17.94■□□□□ 0.46
Cspg4Q8VHY0 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Cspg4Q8VHY0 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cspg4Q8VHY0 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cspg4Q8VHY0 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.93■□□□□ 0.46
Cspg4Q8VHY0 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Cspg4Q8VHY0 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cspg4Q8VHY0 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cspg4Q8VHY0 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC17.93■□□□□ 0.46
Cspg4Q8VHY0 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cspg4Q8VHY0 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cspg4Q8VHY0 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.93■□□□□ 0.46
Cspg4Q8VHY0 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cspg4Q8VHY0 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cspg4Q8VHY0 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cspg4Q8VHY0 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.92■□□□□ 0.46
Cspg4Q8VHY0 Gm43060-201ENSMUST00000200621 289 ntBASIC17.92■□□□□ 0.46
Cspg4Q8VHY0 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cspg4Q8VHY0 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cspg4Q8VHY0 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cspg4Q8VHY0 H3f3aos-201ENSMUST00000097448 2905 ntBASIC17.91■□□□□ 0.46
Cspg4Q8VHY0 Gm22240-201ENSMUST00000175225 82 ntBASIC17.91■□□□□ 0.46
Cspg4Q8VHY0 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.91■□□□□ 0.46
Cspg4Q8VHY0 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.91■□□□□ 0.46
Cspg4Q8VHY0 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.91■□□□□ 0.46
Cspg4Q8VHY0 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cspg4Q8VHY0 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cspg4Q8VHY0 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cspg4Q8VHY0 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cspg4Q8VHY0 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.9■□□□□ 0.46
Cspg4Q8VHY0 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.9■□□□□ 0.46
Cspg4Q8VHY0 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cspg4Q8VHY0 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cspg4Q8VHY0 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
Cspg4Q8VHY0 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cspg4Q8VHY0 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Cspg4Q8VHY0 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Cspg4Q8VHY0 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Cspg4Q8VHY0 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC17.89■□□□□ 0.46
Cspg4Q8VHY0 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Cspg4Q8VHY0 Gm7143-201ENSMUST00000222811 859 ntBASIC17.89■□□□□ 0.46
Cspg4Q8VHY0 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Cspg4Q8VHY0 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Cspg4Q8VHY0 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cspg4Q8VHY0 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cspg4Q8VHY0 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cspg4Q8VHY0 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms