Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdh18Q8VHR0 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdh18Q8VHR0 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Pcdh18Q8VHR0 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Pcdh18Q8VHR0 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdh18Q8VHR0 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh18Q8VHR0 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh18Q8VHR0 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh18Q8VHR0 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh18Q8VHR0 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.73■□□□□ 0.75
Pcdh18Q8VHR0 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh18Q8VHR0 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.73■□□□□ 0.75
Pcdh18Q8VHR0 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.73■□□□□ 0.75
Pcdh18Q8VHR0 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh18Q8VHR0 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh18Q8VHR0 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh18Q8VHR0 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh18Q8VHR0 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Pcdh18Q8VHR0 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh18Q8VHR0 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh18Q8VHR0 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh18Q8VHR0 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Pcdh18Q8VHR0 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdh18Q8VHR0 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.72■□□□□ 0.75
Pcdh18Q8VHR0 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdh18Q8VHR0 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdh18Q8VHR0 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdh18Q8VHR0 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdh18Q8VHR0 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdh18Q8VHR0 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdh18Q8VHR0 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdh18Q8VHR0 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.72■□□□□ 0.75
Pcdh18Q8VHR0 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdh18Q8VHR0 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdh18Q8VHR0 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdh18Q8VHR0 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdh18Q8VHR0 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdh18Q8VHR0 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdh18Q8VHR0 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
Pcdh18Q8VHR0 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
Pcdh18Q8VHR0 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdh18Q8VHR0 Gm14523-201ENSMUST00000117260 558 ntBASIC19.7■□□□□ 0.74
Pcdh18Q8VHR0 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdh18Q8VHR0 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdh18Q8VHR0 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Pcdh18Q8VHR0 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdh18Q8VHR0 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdh18Q8VHR0 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdh18Q8VHR0 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdh18Q8VHR0 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdh18Q8VHR0 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Pcdh18Q8VHR0 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.69■□□□□ 0.74
Pcdh18Q8VHR0 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.69■□□□□ 0.74
Pcdh18Q8VHR0 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdh18Q8VHR0 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Pcdh18Q8VHR0 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdh18Q8VHR0 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdh18Q8VHR0 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdh18Q8VHR0 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.69■□□□□ 0.74
Pcdh18Q8VHR0 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdh18Q8VHR0 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.69■□□□□ 0.74
Pcdh18Q8VHR0 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdh18Q8VHR0 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Pcdh18Q8VHR0 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdh18Q8VHR0 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdh18Q8VHR0 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdh18Q8VHR0 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdh18Q8VHR0 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.68■□□□□ 0.74
Pcdh18Q8VHR0 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdh18Q8VHR0 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdh18Q8VHR0 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdh18Q8VHR0 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdh18Q8VHR0 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Pcdh18Q8VHR0 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh18Q8VHR0 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh18Q8VHR0 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh18Q8VHR0 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh18Q8VHR0 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh18Q8VHR0 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh18Q8VHR0 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh18Q8VHR0 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh18Q8VHR0 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh18Q8VHR0 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Pcdh18Q8VHR0 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdh18Q8VHR0 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdh18Q8VHR0 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdh18Q8VHR0 Gm7332-201ENSMUST00000118351 454 ntBASIC19.66■□□□□ 0.74
Pcdh18Q8VHR0 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdh18Q8VHR0 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Pcdh18Q8VHR0 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdh18Q8VHR0 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdh18Q8VHR0 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.65■□□□□ 0.74
Pcdh18Q8VHR0 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdh18Q8VHR0 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdh18Q8VHR0 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdh18Q8VHR0 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdh18Q8VHR0 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdh18Q8VHR0 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Pcdh18Q8VHR0 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdh18Q8VHR0 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms