Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ubqln1Q8R317 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ubqln1Q8R317 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.54■□□□□ 0.72
Ubqln1Q8R317 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.54■□□□□ 0.72
Ubqln1Q8R317 Gm15820-201ENSMUST00000201566 728 ntBASIC19.54■□□□□ 0.72
Ubqln1Q8R317 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ubqln1Q8R317 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ubqln1Q8R317 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ubqln1Q8R317 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ubqln1Q8R317 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ubqln1Q8R317 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.53■□□□□ 0.72
Ubqln1Q8R317 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ubqln1Q8R317 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.53■□□□□ 0.72
Ubqln1Q8R317 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ubqln1Q8R317 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ubqln1Q8R317 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ubqln1Q8R317 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ubqln1Q8R317 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ubqln1Q8R317 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.52■□□□□ 0.72
Ubqln1Q8R317 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ubqln1Q8R317 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ubqln1Q8R317 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ubqln1Q8R317 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ubqln1Q8R317 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ubqln1Q8R317 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ubqln1Q8R317 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ubqln1Q8R317 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ubqln1Q8R317 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ubqln1Q8R317 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ubqln1Q8R317 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ubqln1Q8R317 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ubqln1Q8R317 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ubqln1Q8R317 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.51■□□□□ 0.71
Ubqln1Q8R317 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ubqln1Q8R317 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ubqln1Q8R317 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ubqln1Q8R317 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ubqln1Q8R317 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ubqln1Q8R317 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
Ubqln1Q8R317 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.5■□□□□ 0.71
Ubqln1Q8R317 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.5■□□□□ 0.71
Ubqln1Q8R317 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.5■□□□□ 0.71
Ubqln1Q8R317 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ubqln1Q8R317 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ubqln1Q8R317 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ubqln1Q8R317 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ubqln1Q8R317 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ubqln1Q8R317 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ubqln1Q8R317 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ubqln1Q8R317 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ubqln1Q8R317 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ubqln1Q8R317 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ubqln1Q8R317 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ubqln1Q8R317 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
Ubqln1Q8R317 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Ubqln1Q8R317 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ubqln1Q8R317 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ubqln1Q8R317 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Ubqln1Q8R317 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ubqln1Q8R317 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ubqln1Q8R317 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ubqln1Q8R317 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ubqln1Q8R317 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ubqln1Q8R317 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ubqln1Q8R317 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ubqln1Q8R317 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ubqln1Q8R317 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Ubqln1Q8R317 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ubqln1Q8R317 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ubqln1Q8R317 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ubqln1Q8R317 Gm40881-201ENSMUST00000223397 166 ntBASIC19.47■□□□□ 0.71
Ubqln1Q8R317 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ubqln1Q8R317 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ubqln1Q8R317 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ubqln1Q8R317 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ubqln1Q8R317 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ubqln1Q8R317 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ubqln1Q8R317 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ubqln1Q8R317 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ubqln1Q8R317 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Ubqln1Q8R317 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Ubqln1Q8R317 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.46■□□□□ 0.71
Ubqln1Q8R317 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.46■□□□□ 0.71
Ubqln1Q8R317 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ubqln1Q8R317 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.45■□□□□ 0.7
Ubqln1Q8R317 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.45■□□□□ 0.7
Ubqln1Q8R317 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.45■□□□□ 0.7
Ubqln1Q8R317 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.45■□□□□ 0.7
Ubqln1Q8R317 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ubqln1Q8R317 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.45■□□□□ 0.7
Ubqln1Q8R317 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Ubqln1Q8R317 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ubqln1Q8R317 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ubqln1Q8R317 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ubqln1Q8R317 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ubqln1Q8R317 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ubqln1Q8R317 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ubqln1Q8R317 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ubqln1Q8R317 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ubqln1Q8R317 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms