Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nudcd3Q8R1N4 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Nudcd3Q8R1N4 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Nudcd3Q8R1N4 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nudcd3Q8R1N4 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
Nudcd3Q8R1N4 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.6■□□□□ 0.89
Nudcd3Q8R1N4 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nudcd3Q8R1N4 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nudcd3Q8R1N4 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nudcd3Q8R1N4 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Nudcd3Q8R1N4 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.59■□□□□ 0.89
Nudcd3Q8R1N4 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nudcd3Q8R1N4 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Nudcd3Q8R1N4 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nudcd3Q8R1N4 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nudcd3Q8R1N4 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nudcd3Q8R1N4 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nudcd3Q8R1N4 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nudcd3Q8R1N4 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nudcd3Q8R1N4 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Nudcd3Q8R1N4 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Nudcd3Q8R1N4 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.58■□□□□ 0.89
Nudcd3Q8R1N4 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Nudcd3Q8R1N4 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Nudcd3Q8R1N4 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Nudcd3Q8R1N4 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nudcd3Q8R1N4 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nudcd3Q8R1N4 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nudcd3Q8R1N4 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nudcd3Q8R1N4 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nudcd3Q8R1N4 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nudcd3Q8R1N4 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nudcd3Q8R1N4 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nudcd3Q8R1N4 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nudcd3Q8R1N4 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nudcd3Q8R1N4 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nudcd3Q8R1N4 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nudcd3Q8R1N4 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Nudcd3Q8R1N4 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nudcd3Q8R1N4 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Nudcd3Q8R1N4 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Nudcd3Q8R1N4 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nudcd3Q8R1N4 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nudcd3Q8R1N4 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nudcd3Q8R1N4 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nudcd3Q8R1N4 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Nudcd3Q8R1N4 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nudcd3Q8R1N4 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nudcd3Q8R1N4 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.55■□□□□ 0.88
Nudcd3Q8R1N4 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Nudcd3Q8R1N4 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Nudcd3Q8R1N4 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Nudcd3Q8R1N4 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nudcd3Q8R1N4 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nudcd3Q8R1N4 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nudcd3Q8R1N4 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nudcd3Q8R1N4 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nudcd3Q8R1N4 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nudcd3Q8R1N4 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.54■□□□□ 0.88
Nudcd3Q8R1N4 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nudcd3Q8R1N4 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nudcd3Q8R1N4 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.54■□□□□ 0.88
Nudcd3Q8R1N4 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nudcd3Q8R1N4 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nudcd3Q8R1N4 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nudcd3Q8R1N4 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Nudcd3Q8R1N4 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nudcd3Q8R1N4 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nudcd3Q8R1N4 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
Nudcd3Q8R1N4 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.53■□□□□ 0.88
Nudcd3Q8R1N4 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Nudcd3Q8R1N4 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nudcd3Q8R1N4 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nudcd3Q8R1N4 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nudcd3Q8R1N4 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nudcd3Q8R1N4 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Nudcd3Q8R1N4 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nudcd3Q8R1N4 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.52■□□□□ 0.88
Nudcd3Q8R1N4 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.52■□□□□ 0.88
Nudcd3Q8R1N4 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nudcd3Q8R1N4 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Nudcd3Q8R1N4 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Nudcd3Q8R1N4 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nudcd3Q8R1N4 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Nudcd3Q8R1N4 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nudcd3Q8R1N4 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Nudcd3Q8R1N4 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Nudcd3Q8R1N4 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Nudcd3Q8R1N4 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.51■□□□□ 0.87
Nudcd3Q8R1N4 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.51■□□□□ 0.87
Nudcd3Q8R1N4 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nudcd3Q8R1N4 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nudcd3Q8R1N4 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nudcd3Q8R1N4 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nudcd3Q8R1N4 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Nudcd3Q8R1N4 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nudcd3Q8R1N4 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Nudcd3Q8R1N4 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Nudcd3Q8R1N4 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Nudcd3Q8R1N4 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms