Protein–RNA interactions for Protein: Q8K3Y3

Lin28a, Protein lin-28 homolog A, mousemouse

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin28aQ8K3Y3 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lin28aQ8K3Y3 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Lin28aQ8K3Y3 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.3■□□□□ 0.68
Lin28aQ8K3Y3 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Lin28aQ8K3Y3 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lin28aQ8K3Y3 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lin28aQ8K3Y3 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lin28aQ8K3Y3 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lin28aQ8K3Y3 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.29■□□□□ 0.68
Lin28aQ8K3Y3 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Lin28aQ8K3Y3 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
Lin28aQ8K3Y3 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lin28aQ8K3Y3 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.29■□□□□ 0.68
Lin28aQ8K3Y3 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.29■□□□□ 0.68
Lin28aQ8K3Y3 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Lin28aQ8K3Y3 Gm21956-201ENSMUST00000179946 522 ntBASIC19.29■□□□□ 0.68
Lin28aQ8K3Y3 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.29■□□□□ 0.68
Lin28aQ8K3Y3 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lin28aQ8K3Y3 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Lin28aQ8K3Y3 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lin28aQ8K3Y3 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Lin28aQ8K3Y3 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Lin28aQ8K3Y3 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lin28aQ8K3Y3 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Lin28aQ8K3Y3 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Lin28aQ8K3Y3 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.28■□□□□ 0.68
Lin28aQ8K3Y3 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.27■□□□□ 0.68
Lin28aQ8K3Y3 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.27■□□□□ 0.68
Lin28aQ8K3Y3 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.26■□□□□ 0.67
Lin28aQ8K3Y3 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Lin28aQ8K3Y3 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Lin28aQ8K3Y3 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Lin28aQ8K3Y3 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Lin28aQ8K3Y3 Gm13241-201ENSMUST00000094493 780 ntBASIC19.26■□□□□ 0.67
Lin28aQ8K3Y3 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lin28aQ8K3Y3 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lin28aQ8K3Y3 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Lin28aQ8K3Y3 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lin28aQ8K3Y3 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lin28aQ8K3Y3 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lin28aQ8K3Y3 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.25■□□□□ 0.67
Lin28aQ8K3Y3 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.25■□□□□ 0.67
Lin28aQ8K3Y3 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.25■□□□□ 0.67
Lin28aQ8K3Y3 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lin28aQ8K3Y3 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lin28aQ8K3Y3 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lin28aQ8K3Y3 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lin28aQ8K3Y3 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Lin28aQ8K3Y3 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lin28aQ8K3Y3 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lin28aQ8K3Y3 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lin28aQ8K3Y3 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Lin28aQ8K3Y3 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
Lin28aQ8K3Y3 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Lin28aQ8K3Y3 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Lin28aQ8K3Y3 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.24■□□□□ 0.67
Lin28aQ8K3Y3 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lin28aQ8K3Y3 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Lin28aQ8K3Y3 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Lin28aQ8K3Y3 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Lin28aQ8K3Y3 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.24■□□□□ 0.67
Lin28aQ8K3Y3 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lin28aQ8K3Y3 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lin28aQ8K3Y3 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lin28aQ8K3Y3 Gm12922-201ENSMUST00000120626 809 ntBASIC19.23■□□□□ 0.67
Lin28aQ8K3Y3 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.23■□□□□ 0.67
Lin28aQ8K3Y3 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Lin28aQ8K3Y3 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lin28aQ8K3Y3 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lin28aQ8K3Y3 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lin28aQ8K3Y3 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.23■□□□□ 0.67
Lin28aQ8K3Y3 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lin28aQ8K3Y3 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.22■□□□□ 0.67
Lin28aQ8K3Y3 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.22■□□□□ 0.67
Lin28aQ8K3Y3 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.22■□□□□ 0.67
Lin28aQ8K3Y3 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.22■□□□□ 0.67
Lin28aQ8K3Y3 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lin28aQ8K3Y3 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lin28aQ8K3Y3 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Lin28aQ8K3Y3 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lin28aQ8K3Y3 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.21■□□□□ 0.67
Lin28aQ8K3Y3 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.21■□□□□ 0.67
Lin28aQ8K3Y3 Gm9870-201ENSMUST00000063874 645 ntBASIC19.21■□□□□ 0.67
Lin28aQ8K3Y3 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lin28aQ8K3Y3 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.21■□□□□ 0.67
Lin28aQ8K3Y3 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.21■□□□□ 0.67
Lin28aQ8K3Y3 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Lin28aQ8K3Y3 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lin28aQ8K3Y3 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Lin28aQ8K3Y3 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.2■□□□□ 0.66
Lin28aQ8K3Y3 Golgb1-201ENSMUST00000023534 498 ntBASIC19.2■□□□□ 0.66
Lin28aQ8K3Y3 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lin28aQ8K3Y3 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Lin28aQ8K3Y3 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Lin28aQ8K3Y3 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lin28aQ8K3Y3 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lin28aQ8K3Y3 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.19■□□□□ 0.66
Lin28aQ8K3Y3 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Lin28aQ8K3Y3 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.19■□□□□ 0.66
Lin28aQ8K3Y3 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms