Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Gm7417-201ENSMUST00000192950 473 ntBASIC23.91■■□□□ 1.42
Rtn1Q8K0T0 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC23.91■■□□□ 1.42
Rtn1Q8K0T0 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Rtn1Q8K0T0 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC23.91■■□□□ 1.42
Rtn1Q8K0T0 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Rtn1Q8K0T0 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC23.9■■□□□ 1.42
Rtn1Q8K0T0 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Rtn1Q8K0T0 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Rtn1Q8K0T0 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
Rtn1Q8K0T0 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Rtn1Q8K0T0 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
Rtn1Q8K0T0 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.42
Rtn1Q8K0T0 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.41
Rtn1Q8K0T0 Rps24-207ENSMUST00000224568 714 ntBASIC23.89■■□□□ 1.41
Rtn1Q8K0T0 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC23.89■■□□□ 1.41
Rtn1Q8K0T0 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Rtn1Q8K0T0 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Rtn1Q8K0T0 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Rtn1Q8K0T0 Gm14117-201ENSMUST00000122417 843 ntBASIC23.88■■□□□ 1.41
Rtn1Q8K0T0 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC23.88■■□□□ 1.41
Rtn1Q8K0T0 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Rtn1Q8K0T0 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
Rtn1Q8K0T0 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Rtn1Q8K0T0 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC23.87■■□□□ 1.41
Rtn1Q8K0T0 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Rtn1Q8K0T0 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Rtn1Q8K0T0 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC23.87■■□□□ 1.41
Rtn1Q8K0T0 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC23.87■■□□□ 1.41
Rtn1Q8K0T0 Gm45102-201ENSMUST00000207427 857 ntBASIC23.87■■□□□ 1.41
Rtn1Q8K0T0 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC23.87■■□□□ 1.41
Rtn1Q8K0T0 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Rtn1Q8K0T0 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Rtn1Q8K0T0 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Rtn1Q8K0T0 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Rtn1Q8K0T0 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Rtn1Q8K0T0 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
Rtn1Q8K0T0 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Rtn1Q8K0T0 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Rtn1Q8K0T0 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Rtn1Q8K0T0 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Rtn1Q8K0T0 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
Rtn1Q8K0T0 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
Rtn1Q8K0T0 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Rtn1Q8K0T0 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Rtn1Q8K0T0 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Rtn1Q8K0T0 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Rtn1Q8K0T0 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Rtn1Q8K0T0 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC23.85■■□□□ 1.41
Rtn1Q8K0T0 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC23.85■■□□□ 1.41
Rtn1Q8K0T0 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
Rtn1Q8K0T0 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
Rtn1Q8K0T0 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Rtn1Q8K0T0 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Rtn1Q8K0T0 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Rtn1Q8K0T0 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Rtn1Q8K0T0 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Rtn1Q8K0T0 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Rtn1Q8K0T0 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC23.83■■□□□ 1.41
Rtn1Q8K0T0 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC23.83■■□□□ 1.41
Rtn1Q8K0T0 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Rtn1Q8K0T0 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.4
Rtn1Q8K0T0 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Rtn1Q8K0T0 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Rtn1Q8K0T0 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Rtn1Q8K0T0 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Rtn1Q8K0T0 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Rtn1Q8K0T0 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC23.82■■□□□ 1.4
Rtn1Q8K0T0 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Rtn1Q8K0T0 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Rtn1Q8K0T0 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
Rtn1Q8K0T0 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
Rtn1Q8K0T0 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Rtn1Q8K0T0 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Rtn1Q8K0T0 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Rtn1Q8K0T0 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
Rtn1Q8K0T0 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
Rtn1Q8K0T0 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC23.8■■□□□ 1.4
Rtn1Q8K0T0 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Rtn1Q8K0T0 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Rtn1Q8K0T0 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Rtn1Q8K0T0 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Rtn1Q8K0T0 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Rtn1Q8K0T0 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Rtn1Q8K0T0 Gm6277-202ENSMUST00000224036 2779 ntBASIC23.79■■□□□ 1.4
Rtn1Q8K0T0 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Rtn1Q8K0T0 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Rtn1Q8K0T0 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Rtn1Q8K0T0 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
Rtn1Q8K0T0 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Rtn1Q8K0T0 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC23.78■■□□□ 1.4
Rtn1Q8K0T0 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
Rtn1Q8K0T0 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Rtn1Q8K0T0 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Rtn1Q8K0T0 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Rtn1Q8K0T0 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
Rtn1Q8K0T0 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Rtn1Q8K0T0 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Rtn1Q8K0T0 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Rtn1Q8K0T0 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Rtn1Q8K0T0 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms