Protein–RNA interactions for Protein: Q8K0H1

Slc47a1, Multidrug and toxin extrusion protein 1, mousemouse

Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc47a1Q8K0H1 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Slc47a1Q8K0H1 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc47a1Q8K0H1 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slc47a1Q8K0H1 Gm45444-201ENSMUST00000211394 898 ntBASIC20.27■□□□□ 0.84
Slc47a1Q8K0H1 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.27■□□□□ 0.84
Slc47a1Q8K0H1 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Slc47a1Q8K0H1 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Slc47a1Q8K0H1 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.83
Slc47a1Q8K0H1 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.83
Slc47a1Q8K0H1 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Slc47a1Q8K0H1 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Slc47a1Q8K0H1 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slc47a1Q8K0H1 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slc47a1Q8K0H1 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
Slc47a1Q8K0H1 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Slc47a1Q8K0H1 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slc47a1Q8K0H1 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slc47a1Q8K0H1 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slc47a1Q8K0H1 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slc47a1Q8K0H1 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slc47a1Q8K0H1 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slc47a1Q8K0H1 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slc47a1Q8K0H1 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.25■□□□□ 0.83
Slc47a1Q8K0H1 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.25■□□□□ 0.83
Slc47a1Q8K0H1 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slc47a1Q8K0H1 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.24■□□□□ 0.83
Slc47a1Q8K0H1 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Slc47a1Q8K0H1 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slc47a1Q8K0H1 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Slc47a1Q8K0H1 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
Slc47a1Q8K0H1 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slc47a1Q8K0H1 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Slc47a1Q8K0H1 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slc47a1Q8K0H1 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slc47a1Q8K0H1 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Slc47a1Q8K0H1 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc47a1Q8K0H1 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Slc47a1Q8K0H1 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc47a1Q8K0H1 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc47a1Q8K0H1 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Slc47a1Q8K0H1 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Slc47a1Q8K0H1 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc47a1Q8K0H1 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc47a1Q8K0H1 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Slc47a1Q8K0H1 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Slc47a1Q8K0H1 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Slc47a1Q8K0H1 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Slc47a1Q8K0H1 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Slc47a1Q8K0H1 Gm13238-201ENSMUST00000117655 780 ntBASIC20.22■□□□□ 0.83
Slc47a1Q8K0H1 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Slc47a1Q8K0H1 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Slc47a1Q8K0H1 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Slc47a1Q8K0H1 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Slc47a1Q8K0H1 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Slc47a1Q8K0H1 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slc47a1Q8K0H1 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slc47a1Q8K0H1 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slc47a1Q8K0H1 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slc47a1Q8K0H1 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slc47a1Q8K0H1 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slc47a1Q8K0H1 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slc47a1Q8K0H1 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slc47a1Q8K0H1 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Slc47a1Q8K0H1 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slc47a1Q8K0H1 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Slc47a1Q8K0H1 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Slc47a1Q8K0H1 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.2■□□□□ 0.82
Slc47a1Q8K0H1 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Slc47a1Q8K0H1 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.2■□□□□ 0.82
Slc47a1Q8K0H1 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slc47a1Q8K0H1 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Slc47a1Q8K0H1 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slc47a1Q8K0H1 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.19■□□□□ 0.82
Slc47a1Q8K0H1 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.19■□□□□ 0.82
Slc47a1Q8K0H1 Gm43566-201ENSMUST00000196851 808 ntBASIC20.19■□□□□ 0.82
Slc47a1Q8K0H1 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Slc47a1Q8K0H1 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Slc47a1Q8K0H1 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Slc47a1Q8K0H1 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Slc47a1Q8K0H1 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Slc47a1Q8K0H1 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Slc47a1Q8K0H1 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.18■□□□□ 0.82
Slc47a1Q8K0H1 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Slc47a1Q8K0H1 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Slc47a1Q8K0H1 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Slc47a1Q8K0H1 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Slc47a1Q8K0H1 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Slc47a1Q8K0H1 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Slc47a1Q8K0H1 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Slc47a1Q8K0H1 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Slc47a1Q8K0H1 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Slc47a1Q8K0H1 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.16■□□□□ 0.82
Slc47a1Q8K0H1 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Slc47a1Q8K0H1 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.15■□□□□ 0.82
Slc47a1Q8K0H1 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Slc47a1Q8K0H1 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slc47a1Q8K0H1 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slc47a1Q8K0H1 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slc47a1Q8K0H1 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slc47a1Q8K0H1 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms