Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.7■□□□□ 0.9
Clip4Q8CI96 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Clip4Q8CI96 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Clip4Q8CI96 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Clip4Q8CI96 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.7■□□□□ 0.9
Clip4Q8CI96 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Clip4Q8CI96 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
Clip4Q8CI96 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Clip4Q8CI96 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Clip4Q8CI96 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Clip4Q8CI96 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.69■□□□□ 0.9
Clip4Q8CI96 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.69■□□□□ 0.9
Clip4Q8CI96 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Clip4Q8CI96 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Clip4Q8CI96 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clip4Q8CI96 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.68■□□□□ 0.9
Clip4Q8CI96 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
Clip4Q8CI96 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clip4Q8CI96 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clip4Q8CI96 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clip4Q8CI96 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clip4Q8CI96 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clip4Q8CI96 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.67■□□□□ 0.9
Clip4Q8CI96 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
Clip4Q8CI96 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clip4Q8CI96 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Clip4Q8CI96 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Clip4Q8CI96 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clip4Q8CI96 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clip4Q8CI96 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clip4Q8CI96 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clip4Q8CI96 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clip4Q8CI96 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clip4Q8CI96 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clip4Q8CI96 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.66■□□□□ 0.9
Clip4Q8CI96 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.66■□□□□ 0.9
Clip4Q8CI96 Rps24-207ENSMUST00000224568 714 ntBASIC20.66■□□□□ 0.9
Clip4Q8CI96 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clip4Q8CI96 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clip4Q8CI96 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clip4Q8CI96 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clip4Q8CI96 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
Clip4Q8CI96 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Clip4Q8CI96 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Clip4Q8CI96 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.65■□□□□ 0.9
Clip4Q8CI96 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Clip4Q8CI96 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
Clip4Q8CI96 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Clip4Q8CI96 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Clip4Q8CI96 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Clip4Q8CI96 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Clip4Q8CI96 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Clip4Q8CI96 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Clip4Q8CI96 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Clip4Q8CI96 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Clip4Q8CI96 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Clip4Q8CI96 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Clip4Q8CI96 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Clip4Q8CI96 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clip4Q8CI96 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clip4Q8CI96 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clip4Q8CI96 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clip4Q8CI96 Gm45102-201ENSMUST00000207427 857 ntBASIC20.63■□□□□ 0.89
Clip4Q8CI96 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clip4Q8CI96 Gm9959-201ENSMUST00000068277 390 ntBASIC20.63■□□□□ 0.89
Clip4Q8CI96 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clip4Q8CI96 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Clip4Q8CI96 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clip4Q8CI96 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clip4Q8CI96 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clip4Q8CI96 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clip4Q8CI96 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Clip4Q8CI96 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clip4Q8CI96 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clip4Q8CI96 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Clip4Q8CI96 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Clip4Q8CI96 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Clip4Q8CI96 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Clip4Q8CI96 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Clip4Q8CI96 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.61■□□□□ 0.89
Clip4Q8CI96 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.61■□□□□ 0.89
Clip4Q8CI96 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Clip4Q8CI96 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Clip4Q8CI96 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clip4Q8CI96 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clip4Q8CI96 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.6■□□□□ 0.89
Clip4Q8CI96 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clip4Q8CI96 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.6■□□□□ 0.89
Clip4Q8CI96 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clip4Q8CI96 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clip4Q8CI96 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clip4Q8CI96 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Clip4Q8CI96 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clip4Q8CI96 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clip4Q8CI96 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.59■□□□□ 0.89
Clip4Q8CI96 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.59■□□□□ 0.89
Clip4Q8CI96 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.59■□□□□ 0.89
Clip4Q8CI96 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Clip4Q8CI96 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.59■□□□□ 0.89
Clip4Q8CI96 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms