Protein–RNA interactions for Protein: Q8CI71

Vps50, Syndetin, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps50Q8CI71 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vps50Q8CI71 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Vps50Q8CI71 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vps50Q8CI71 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vps50Q8CI71 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vps50Q8CI71 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Vps50Q8CI71 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.12■□□□□ 0.81
Vps50Q8CI71 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.12■□□□□ 0.81
Vps50Q8CI71 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vps50Q8CI71 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vps50Q8CI71 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vps50Q8CI71 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.11■□□□□ 0.81
Vps50Q8CI71 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Vps50Q8CI71 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Vps50Q8CI71 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vps50Q8CI71 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vps50Q8CI71 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Vps50Q8CI71 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Vps50Q8CI71 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.1■□□□□ 0.81
Vps50Q8CI71 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.1■□□□□ 0.81
Vps50Q8CI71 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vps50Q8CI71 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Vps50Q8CI71 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vps50Q8CI71 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vps50Q8CI71 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Vps50Q8CI71 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vps50Q8CI71 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vps50Q8CI71 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vps50Q8CI71 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Vps50Q8CI71 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Vps50Q8CI71 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.09■□□□□ 0.81
Vps50Q8CI71 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Vps50Q8CI71 Gm45102-201ENSMUST00000207427 857 ntBASIC20.09■□□□□ 0.81
Vps50Q8CI71 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Vps50Q8CI71 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Vps50Q8CI71 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Vps50Q8CI71 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
Vps50Q8CI71 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Vps50Q8CI71 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Vps50Q8CI71 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Vps50Q8CI71 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Vps50Q8CI71 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
Vps50Q8CI71 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Vps50Q8CI71 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.08■□□□□ 0.81
Vps50Q8CI71 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.08■□□□□ 0.81
Vps50Q8CI71 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
Vps50Q8CI71 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Vps50Q8CI71 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Vps50Q8CI71 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
Vps50Q8CI71 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.07■□□□□ 0.8
Vps50Q8CI71 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.07■□□□□ 0.8
Vps50Q8CI71 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Vps50Q8CI71 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Vps50Q8CI71 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Vps50Q8CI71 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Vps50Q8CI71 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Vps50Q8CI71 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Vps50Q8CI71 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Vps50Q8CI71 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
Vps50Q8CI71 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vps50Q8CI71 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vps50Q8CI71 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.05■□□□□ 0.8
Vps50Q8CI71 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vps50Q8CI71 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vps50Q8CI71 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.05■□□□□ 0.8
Vps50Q8CI71 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.05■□□□□ 0.8
Vps50Q8CI71 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vps50Q8CI71 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vps50Q8CI71 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vps50Q8CI71 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
Vps50Q8CI71 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vps50Q8CI71 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Vps50Q8CI71 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vps50Q8CI71 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.04■□□□□ 0.8
Vps50Q8CI71 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vps50Q8CI71 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.03■□□□□ 0.8
Vps50Q8CI71 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vps50Q8CI71 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vps50Q8CI71 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Vps50Q8CI71 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.03■□□□□ 0.8
Vps50Q8CI71 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.03■□□□□ 0.8
Vps50Q8CI71 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Vps50Q8CI71 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vps50Q8CI71 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
Vps50Q8CI71 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vps50Q8CI71 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Vps50Q8CI71 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.02■□□□□ 0.8
Vps50Q8CI71 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Vps50Q8CI71 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
Vps50Q8CI71 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Vps50Q8CI71 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Vps50Q8CI71 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Vps50Q8CI71 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vps50Q8CI71 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Vps50Q8CI71 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.01■□□□□ 0.79
Vps50Q8CI71 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vps50Q8CI71 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vps50Q8CI71 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vps50Q8CI71 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Vps50Q8CI71 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms