Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.2■□□□□ 0.82
Rab43Q8CG50 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rab43Q8CG50 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rab43Q8CG50 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rab43Q8CG50 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.19■□□□□ 0.82
Rab43Q8CG50 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rab43Q8CG50 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rab43Q8CG50 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rab43Q8CG50 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rab43Q8CG50 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Rab43Q8CG50 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rab43Q8CG50 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Rab43Q8CG50 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rab43Q8CG50 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rab43Q8CG50 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rab43Q8CG50 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rab43Q8CG50 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.19■□□□□ 0.82
Rab43Q8CG50 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rab43Q8CG50 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rab43Q8CG50 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rab43Q8CG50 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rab43Q8CG50 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.18■□□□□ 0.82
Rab43Q8CG50 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
Rab43Q8CG50 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rab43Q8CG50 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.18■□□□□ 0.82
Rab43Q8CG50 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.18■□□□□ 0.82
Rab43Q8CG50 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.18■□□□□ 0.82
Rab43Q8CG50 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rab43Q8CG50 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.18■□□□□ 0.82
Rab43Q8CG50 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rab43Q8CG50 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rab43Q8CG50 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Rab43Q8CG50 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
Rab43Q8CG50 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Rab43Q8CG50 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rab43Q8CG50 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rab43Q8CG50 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.17■□□□□ 0.82
Rab43Q8CG50 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.17■□□□□ 0.82
Rab43Q8CG50 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Rab43Q8CG50 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Rab43Q8CG50 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rab43Q8CG50 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rab43Q8CG50 Gm8495-201ENSMUST00000188740 694 ntBASIC20.16■□□□□ 0.82
Rab43Q8CG50 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rab43Q8CG50 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rab43Q8CG50 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rab43Q8CG50 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.15■□□□□ 0.82
Rab43Q8CG50 Gm8493-201ENSMUST00000196881 489 ntBASIC20.15■□□□□ 0.82
Rab43Q8CG50 Gm43017-201ENSMUST00000198296 752 ntBASIC20.15■□□□□ 0.82
Rab43Q8CG50 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.15■□□□□ 0.82
Rab43Q8CG50 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Rab43Q8CG50 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rab43Q8CG50 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.15■□□□□ 0.82
Rab43Q8CG50 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
Rab43Q8CG50 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rab43Q8CG50 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rab43Q8CG50 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rab43Q8CG50 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rab43Q8CG50 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rab43Q8CG50 Gm18284-201ENSMUST00000172604 624 ntBASIC20.14■□□□□ 0.81
Rab43Q8CG50 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rab43Q8CG50 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rab43Q8CG50 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rab43Q8CG50 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rab43Q8CG50 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rab43Q8CG50 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rab43Q8CG50 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rab43Q8CG50 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Rab43Q8CG50 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rab43Q8CG50 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.12■□□□□ 0.81
Rab43Q8CG50 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rab43Q8CG50 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rab43Q8CG50 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Rab43Q8CG50 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.12■□□□□ 0.81
Rab43Q8CG50 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.12■□□□□ 0.81
Rab43Q8CG50 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rab43Q8CG50 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rab43Q8CG50 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rab43Q8CG50 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
Rab43Q8CG50 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.11■□□□□ 0.81
Rab43Q8CG50 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rab43Q8CG50 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rab43Q8CG50 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rab43Q8CG50 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rab43Q8CG50 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rab43Q8CG50 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.11■□□□□ 0.81
Rab43Q8CG50 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.1■□□□□ 0.81
Rab43Q8CG50 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.1■□□□□ 0.81
Rab43Q8CG50 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rab43Q8CG50 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.1■□□□□ 0.81
Rab43Q8CG50 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rab43Q8CG50 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rab43Q8CG50 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rab43Q8CG50 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Rab43Q8CG50 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rab43Q8CG50 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rab43Q8CG50 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rab43Q8CG50 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rab43Q8CG50 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rab43Q8CG50 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms