Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhb7Q8CDY9 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhb7Q8CDY9 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhb7Q8CDY9 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.66■□□□□ 0.9
Pcdhb7Q8CDY9 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhb7Q8CDY9 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.65■□□□□ 0.9
Pcdhb7Q8CDY9 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhb7Q8CDY9 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhb7Q8CDY9 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Pcdhb7Q8CDY9 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhb7Q8CDY9 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.65■□□□□ 0.9
Pcdhb7Q8CDY9 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Pcdhb7Q8CDY9 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Pcdhb7Q8CDY9 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Pcdhb7Q8CDY9 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pcdhb7Q8CDY9 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pcdhb7Q8CDY9 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pcdhb7Q8CDY9 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pcdhb7Q8CDY9 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pcdhb7Q8CDY9 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhb7Q8CDY9 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.64■□□□□ 0.89
Pcdhb7Q8CDY9 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhb7Q8CDY9 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhb7Q8CDY9 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
Pcdhb7Q8CDY9 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhb7Q8CDY9 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
Pcdhb7Q8CDY9 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhb7Q8CDY9 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Pcdhb7Q8CDY9 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhb7Q8CDY9 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhb7Q8CDY9 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Pcdhb7Q8CDY9 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
Pcdhb7Q8CDY9 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.63■□□□□ 0.89
Pcdhb7Q8CDY9 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhb7Q8CDY9 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhb7Q8CDY9 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhb7Q8CDY9 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb7Q8CDY9 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb7Q8CDY9 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb7Q8CDY9 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.62■□□□□ 0.89
Pcdhb7Q8CDY9 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb7Q8CDY9 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Pcdhb7Q8CDY9 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb7Q8CDY9 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb7Q8CDY9 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhb7Q8CDY9 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.61■□□□□ 0.89
Pcdhb7Q8CDY9 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhb7Q8CDY9 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhb7Q8CDY9 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Pcdhb7Q8CDY9 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhb7Q8CDY9 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhb7Q8CDY9 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhb7Q8CDY9 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhb7Q8CDY9 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhb7Q8CDY9 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.6■□□□□ 0.89
Pcdhb7Q8CDY9 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhb7Q8CDY9 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.6■□□□□ 0.89
Pcdhb7Q8CDY9 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhb7Q8CDY9 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Pcdhb7Q8CDY9 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb7Q8CDY9 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb7Q8CDY9 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb7Q8CDY9 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb7Q8CDY9 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Pcdhb7Q8CDY9 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb7Q8CDY9 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Pcdhb7Q8CDY9 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb7Q8CDY9 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb7Q8CDY9 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb7Q8CDY9 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb7Q8CDY9 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
Pcdhb7Q8CDY9 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhb7Q8CDY9 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
Pcdhb7Q8CDY9 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Pcdhb7Q8CDY9 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.58■□□□□ 0.89
Pcdhb7Q8CDY9 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Pcdhb7Q8CDY9 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdhb7Q8CDY9 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb7Q8CDY9 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.57■□□□□ 0.88
Pcdhb7Q8CDY9 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb7Q8CDY9 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb7Q8CDY9 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb7Q8CDY9 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb7Q8CDY9 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.57■□□□□ 0.88
Pcdhb7Q8CDY9 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb7Q8CDY9 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb7Q8CDY9 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb7Q8CDY9 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhb7Q8CDY9 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhb7Q8CDY9 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhb7Q8CDY9 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhb7Q8CDY9 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Pcdhb7Q8CDY9 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Pcdhb7Q8CDY9 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhb7Q8CDY9 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.56■□□□□ 0.88
Pcdhb7Q8CDY9 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhb7Q8CDY9 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhb7Q8CDY9 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhb7Q8CDY9 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Pcdhb7Q8CDY9 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 583.2 ms