Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Shisa4Q8CA71 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Shisa4Q8CA71 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
Shisa4Q8CA71 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
Shisa4Q8CA71 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Shisa4Q8CA71 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Shisa4Q8CA71 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Shisa4Q8CA71 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Shisa4Q8CA71 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Shisa4Q8CA71 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC24.34■■□□□ 1.49
Shisa4Q8CA71 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
Shisa4Q8CA71 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
Shisa4Q8CA71 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
Shisa4Q8CA71 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
Shisa4Q8CA71 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Shisa4Q8CA71 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Shisa4Q8CA71 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Shisa4Q8CA71 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC24.31■■□□□ 1.48
Shisa4Q8CA71 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC24.31■■□□□ 1.48
Shisa4Q8CA71 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Shisa4Q8CA71 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Shisa4Q8CA71 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Shisa4Q8CA71 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Shisa4Q8CA71 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Shisa4Q8CA71 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Shisa4Q8CA71 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Shisa4Q8CA71 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Shisa4Q8CA71 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Shisa4Q8CA71 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Shisa4Q8CA71 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Shisa4Q8CA71 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
Shisa4Q8CA71 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Shisa4Q8CA71 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
Shisa4Q8CA71 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
Shisa4Q8CA71 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Shisa4Q8CA71 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Shisa4Q8CA71 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Shisa4Q8CA71 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC24.29■■□□□ 1.48
Shisa4Q8CA71 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC24.29■■□□□ 1.48
Shisa4Q8CA71 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Shisa4Q8CA71 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC24.28■■□□□ 1.48
Shisa4Q8CA71 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
Shisa4Q8CA71 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Shisa4Q8CA71 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Shisa4Q8CA71 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Shisa4Q8CA71 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Shisa4Q8CA71 Gm44949-201ENSMUST00000206423 1450 ntBASIC24.27■■□□□ 1.48
Shisa4Q8CA71 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Shisa4Q8CA71 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
Shisa4Q8CA71 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC24.27■■□□□ 1.48
Shisa4Q8CA71 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Shisa4Q8CA71 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Shisa4Q8CA71 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC24.26■■□□□ 1.47
Shisa4Q8CA71 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Shisa4Q8CA71 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
Shisa4Q8CA71 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Shisa4Q8CA71 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC24.26■■□□□ 1.47
Shisa4Q8CA71 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Shisa4Q8CA71 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC24.26■■□□□ 1.47
Shisa4Q8CA71 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Shisa4Q8CA71 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Shisa4Q8CA71 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Shisa4Q8CA71 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Shisa4Q8CA71 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Shisa4Q8CA71 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC24.23■■□□□ 1.47
Shisa4Q8CA71 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Shisa4Q8CA71 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Shisa4Q8CA71 Gm13241-201ENSMUST00000094493 780 ntBASIC24.23■■□□□ 1.47
Shisa4Q8CA71 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Shisa4Q8CA71 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Shisa4Q8CA71 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
Shisa4Q8CA71 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC24.22■■□□□ 1.47
Shisa4Q8CA71 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Shisa4Q8CA71 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Shisa4Q8CA71 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Shisa4Q8CA71 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Shisa4Q8CA71 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
Shisa4Q8CA71 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Shisa4Q8CA71 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Shisa4Q8CA71 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
Shisa4Q8CA71 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
Shisa4Q8CA71 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Shisa4Q8CA71 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Shisa4Q8CA71 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.47
Shisa4Q8CA71 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
Shisa4Q8CA71 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
Shisa4Q8CA71 Gm5913-201ENSMUST00000119397 1399 ntBASIC24.2■■□□□ 1.46
Shisa4Q8CA71 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Shisa4Q8CA71 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Shisa4Q8CA71 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Shisa4Q8CA71 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
Shisa4Q8CA71 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
Shisa4Q8CA71 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Shisa4Q8CA71 Gm6277-202ENSMUST00000224036 2779 ntBASIC24.2■■□□□ 1.46
Shisa4Q8CA71 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
Shisa4Q8CA71 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC24.19■■□□□ 1.46
Shisa4Q8CA71 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Shisa4Q8CA71 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Shisa4Q8CA71 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Shisa4Q8CA71 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Retrieved 100 of 76,532 protein–RNA pairs in 103.6 ms