Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC24.4■■□□□ 1.5
Usp44Q8C2S0 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Usp44Q8C2S0 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Usp44Q8C2S0 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Usp44Q8C2S0 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC24.39■■□□□ 1.5
Usp44Q8C2S0 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Usp44Q8C2S0 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Usp44Q8C2S0 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
Usp44Q8C2S0 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Usp44Q8C2S0 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Usp44Q8C2S0 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Usp44Q8C2S0 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Usp44Q8C2S0 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC24.38■■□□□ 1.49
Usp44Q8C2S0 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Usp44Q8C2S0 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Usp44Q8C2S0 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Usp44Q8C2S0 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC24.38■■□□□ 1.49
Usp44Q8C2S0 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Usp44Q8C2S0 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Usp44Q8C2S0 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
Usp44Q8C2S0 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Usp44Q8C2S0 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Usp44Q8C2S0 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Usp44Q8C2S0 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Usp44Q8C2S0 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC24.36■■□□□ 1.49
Usp44Q8C2S0 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC24.36■■□□□ 1.49
Usp44Q8C2S0 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Usp44Q8C2S0 Gm38160-201ENSMUST00000193090 2499 ntBASIC24.36■■□□□ 1.49
Usp44Q8C2S0 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Usp44Q8C2S0 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Usp44Q8C2S0 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC24.35■■□□□ 1.49
Usp44Q8C2S0 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
Usp44Q8C2S0 Gm14117-201ENSMUST00000122417 843 ntBASIC24.35■■□□□ 1.49
Usp44Q8C2S0 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC24.35■■□□□ 1.49
Usp44Q8C2S0 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Usp44Q8C2S0 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Usp44Q8C2S0 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Usp44Q8C2S0 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC24.35■■□□□ 1.49
Usp44Q8C2S0 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Usp44Q8C2S0 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Usp44Q8C2S0 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Usp44Q8C2S0 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Usp44Q8C2S0 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Usp44Q8C2S0 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC24.34■■□□□ 1.49
Usp44Q8C2S0 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC24.34■■□□□ 1.49
Usp44Q8C2S0 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Usp44Q8C2S0 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Usp44Q8C2S0 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.48
Usp44Q8C2S0 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Usp44Q8C2S0 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Usp44Q8C2S0 Rps24-207ENSMUST00000224568 714 ntBASIC24.32■■□□□ 1.48
Usp44Q8C2S0 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
Usp44Q8C2S0 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Usp44Q8C2S0 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Usp44Q8C2S0 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Usp44Q8C2S0 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Usp44Q8C2S0 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC24.31■■□□□ 1.48
Usp44Q8C2S0 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC24.31■■□□□ 1.48
Usp44Q8C2S0 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
Usp44Q8C2S0 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Usp44Q8C2S0 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Usp44Q8C2S0 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Usp44Q8C2S0 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Usp44Q8C2S0 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Usp44Q8C2S0 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Usp44Q8C2S0 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Usp44Q8C2S0 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Usp44Q8C2S0 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Usp44Q8C2S0 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
Usp44Q8C2S0 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC24.29■■□□□ 1.48
Usp44Q8C2S0 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
Usp44Q8C2S0 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Usp44Q8C2S0 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
Usp44Q8C2S0 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Usp44Q8C2S0 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC24.29■■□□□ 1.48
Usp44Q8C2S0 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Usp44Q8C2S0 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Usp44Q8C2S0 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
Usp44Q8C2S0 AC122428.2-201ENSMUST00000216321 1832 ntBASIC24.28■■□□□ 1.48
Usp44Q8C2S0 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Usp44Q8C2S0 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Usp44Q8C2S0 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Usp44Q8C2S0 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC24.28■■□□□ 1.48
Usp44Q8C2S0 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Usp44Q8C2S0 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Usp44Q8C2S0 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Usp44Q8C2S0 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Usp44Q8C2S0 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Usp44Q8C2S0 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Usp44Q8C2S0 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Usp44Q8C2S0 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Usp44Q8C2S0 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Usp44Q8C2S0 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Usp44Q8C2S0 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Usp44Q8C2S0 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Usp44Q8C2S0 Gm7143-201ENSMUST00000222811 859 ntBASIC24.27■■□□□ 1.48
Usp44Q8C2S0 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Usp44Q8C2S0 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Usp44Q8C2S0 Gm22238-201ENSMUST00000175222 88 ntBASIC24.26■■□□□ 1.47
Usp44Q8C2S0 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC24.26■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms