Protein–RNA interactions for Protein: Q8BLR2

Cpne4, Copine-4, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne4Q8BLR2 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Cpne4Q8BLR2 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cpne4Q8BLR2 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cpne4Q8BLR2 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cpne4Q8BLR2 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cpne4Q8BLR2 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cpne4Q8BLR2 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Cpne4Q8BLR2 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cpne4Q8BLR2 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.48■□□□□ 0.55
Cpne4Q8BLR2 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.48■□□□□ 0.55
Cpne4Q8BLR2 Gm22238-201ENSMUST00000175222 88 ntBASIC18.48■□□□□ 0.55
Cpne4Q8BLR2 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cpne4Q8BLR2 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cpne4Q8BLR2 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cpne4Q8BLR2 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cpne4Q8BLR2 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.48■□□□□ 0.55
Cpne4Q8BLR2 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cpne4Q8BLR2 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cpne4Q8BLR2 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Cpne4Q8BLR2 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cpne4Q8BLR2 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.47■□□□□ 0.55
Cpne4Q8BLR2 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
Cpne4Q8BLR2 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Cpne4Q8BLR2 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Cpne4Q8BLR2 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cpne4Q8BLR2 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cpne4Q8BLR2 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.46■□□□□ 0.55
Cpne4Q8BLR2 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cpne4Q8BLR2 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cpne4Q8BLR2 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Cpne4Q8BLR2 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cpne4Q8BLR2 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.45■□□□□ 0.54
Cpne4Q8BLR2 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cpne4Q8BLR2 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cpne4Q8BLR2 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.45■□□□□ 0.54
Cpne4Q8BLR2 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Cpne4Q8BLR2 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cpne4Q8BLR2 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Cpne4Q8BLR2 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cpne4Q8BLR2 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.44■□□□□ 0.54
Cpne4Q8BLR2 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cpne4Q8BLR2 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cpne4Q8BLR2 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cpne4Q8BLR2 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Cpne4Q8BLR2 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cpne4Q8BLR2 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Cpne4Q8BLR2 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cpne4Q8BLR2 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cpne4Q8BLR2 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Cpne4Q8BLR2 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cpne4Q8BLR2 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.43■□□□□ 0.54
Cpne4Q8BLR2 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cpne4Q8BLR2 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cpne4Q8BLR2 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cpne4Q8BLR2 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cpne4Q8BLR2 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.43■□□□□ 0.54
Cpne4Q8BLR2 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cpne4Q8BLR2 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cpne4Q8BLR2 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cpne4Q8BLR2 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cpne4Q8BLR2 Notumos-201ENSMUST00000151998 2659 ntBASIC18.42■□□□□ 0.54
Cpne4Q8BLR2 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cpne4Q8BLR2 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cpne4Q8BLR2 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.42■□□□□ 0.54
Cpne4Q8BLR2 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.42■□□□□ 0.54
Cpne4Q8BLR2 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cpne4Q8BLR2 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Cpne4Q8BLR2 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cpne4Q8BLR2 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cpne4Q8BLR2 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Cpne4Q8BLR2 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cpne4Q8BLR2 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.41■□□□□ 0.54
Cpne4Q8BLR2 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cpne4Q8BLR2 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cpne4Q8BLR2 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.4■□□□□ 0.54
Cpne4Q8BLR2 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cpne4Q8BLR2 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cpne4Q8BLR2 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Cpne4Q8BLR2 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cpne4Q8BLR2 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.4■□□□□ 0.54
Cpne4Q8BLR2 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cpne4Q8BLR2 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cpne4Q8BLR2 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.4■□□□□ 0.54
Cpne4Q8BLR2 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cpne4Q8BLR2 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Cpne4Q8BLR2 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cpne4Q8BLR2 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cpne4Q8BLR2 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cpne4Q8BLR2 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cpne4Q8BLR2 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.39■□□□□ 0.53
Cpne4Q8BLR2 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cpne4Q8BLR2 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.39■□□□□ 0.53
Cpne4Q8BLR2 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.39■□□□□ 0.53
Cpne4Q8BLR2 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cpne4Q8BLR2 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cpne4Q8BLR2 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cpne4Q8BLR2 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cpne4Q8BLR2 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cpne4Q8BLR2 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cpne4Q8BLR2 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms