Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Chmp2bQ8BJF9 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Chmp2bQ8BJF9 Gm5913-201ENSMUST00000119397 1399 ntBASIC21.08■□□□□ 0.96
Chmp2bQ8BJF9 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Chmp2bQ8BJF9 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chmp2bQ8BJF9 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Chmp2bQ8BJF9 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.07■□□□□ 0.96
Chmp2bQ8BJF9 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.07■□□□□ 0.96
Chmp2bQ8BJF9 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC21.07■□□□□ 0.96
Chmp2bQ8BJF9 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chmp2bQ8BJF9 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chmp2bQ8BJF9 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Chmp2bQ8BJF9 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Chmp2bQ8BJF9 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Chmp2bQ8BJF9 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.06■□□□□ 0.96
Chmp2bQ8BJF9 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Chmp2bQ8BJF9 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chmp2bQ8BJF9 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chmp2bQ8BJF9 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chmp2bQ8BJF9 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chmp2bQ8BJF9 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chmp2bQ8BJF9 Mir6538-201ENSMUST00000183713 110 ntBASIC21.05■□□□□ 0.96
Chmp2bQ8BJF9 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Chmp2bQ8BJF9 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.05■□□□□ 0.96
Chmp2bQ8BJF9 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Chmp2bQ8BJF9 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Chmp2bQ8BJF9 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chmp2bQ8BJF9 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chmp2bQ8BJF9 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chmp2bQ8BJF9 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chmp2bQ8BJF9 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Chmp2bQ8BJF9 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chmp2bQ8BJF9 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chmp2bQ8BJF9 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chmp2bQ8BJF9 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chmp2bQ8BJF9 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chmp2bQ8BJF9 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chmp2bQ8BJF9 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Chmp2bQ8BJF9 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chmp2bQ8BJF9 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chmp2bQ8BJF9 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chmp2bQ8BJF9 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chmp2bQ8BJF9 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chmp2bQ8BJF9 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC21.02■□□□□ 0.96
Chmp2bQ8BJF9 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Chmp2bQ8BJF9 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
Chmp2bQ8BJF9 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Chmp2bQ8BJF9 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chmp2bQ8BJF9 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chmp2bQ8BJF9 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Chmp2bQ8BJF9 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Chmp2bQ8BJF9 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chmp2bQ8BJF9 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Chmp2bQ8BJF9 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chmp2bQ8BJF9 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chmp2bQ8BJF9 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chmp2bQ8BJF9 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Chmp2bQ8BJF9 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC21■□□□□ 0.95
Chmp2bQ8BJF9 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC21■□□□□ 0.95
Chmp2bQ8BJF9 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC21■□□□□ 0.95
Chmp2bQ8BJF9 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21■□□□□ 0.95
Chmp2bQ8BJF9 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC21■□□□□ 0.95
Chmp2bQ8BJF9 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chmp2bQ8BJF9 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chmp2bQ8BJF9 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chmp2bQ8BJF9 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chmp2bQ8BJF9 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC21■□□□□ 0.95
Chmp2bQ8BJF9 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chmp2bQ8BJF9 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chmp2bQ8BJF9 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chmp2bQ8BJF9 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chmp2bQ8BJF9 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chmp2bQ8BJF9 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Chmp2bQ8BJF9 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.99■□□□□ 0.95
Chmp2bQ8BJF9 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.99■□□□□ 0.95
Chmp2bQ8BJF9 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Chmp2bQ8BJF9 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chmp2bQ8BJF9 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chmp2bQ8BJF9 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chmp2bQ8BJF9 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.98■□□□□ 0.95
Chmp2bQ8BJF9 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chmp2bQ8BJF9 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chmp2bQ8BJF9 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.98■□□□□ 0.95
Chmp2bQ8BJF9 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
Chmp2bQ8BJF9 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.98■□□□□ 0.95
Chmp2bQ8BJF9 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chmp2bQ8BJF9 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Chmp2bQ8BJF9 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
Chmp2bQ8BJF9 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.97■□□□□ 0.95
Chmp2bQ8BJF9 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Chmp2bQ8BJF9 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chmp2bQ8BJF9 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.97■□□□□ 0.95
Chmp2bQ8BJF9 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.97■□□□□ 0.95
Chmp2bQ8BJF9 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chmp2bQ8BJF9 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
Chmp2bQ8BJF9 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.97■□□□□ 0.95
Chmp2bQ8BJF9 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chmp2bQ8BJF9 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Chmp2bQ8BJF9 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chmp2bQ8BJF9 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms