Protein–RNA interactions for Protein: Q8BHB0

Nod1, Nucleotide-binding oligomerization domain-containing protein 1, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nod1Q8BHB0 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.8■■□□□ 1.08
Nod1Q8BHB0 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nod1Q8BHB0 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nod1Q8BHB0 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Nod1Q8BHB0 Gm10657-201ENSMUST00000193528 1031 ntBASIC21.8■■□□□ 1.08
Nod1Q8BHB0 Gm7143-201ENSMUST00000222811 859 ntBASIC21.8■■□□□ 1.08
Nod1Q8BHB0 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nod1Q8BHB0 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nod1Q8BHB0 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nod1Q8BHB0 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nod1Q8BHB0 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Nod1Q8BHB0 Gm8770-201ENSMUST00000121113 1109 ntBASIC21.79■■□□□ 1.08
Nod1Q8BHB0 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Nod1Q8BHB0 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Nod1Q8BHB0 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nod1Q8BHB0 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nod1Q8BHB0 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.78■■□□□ 1.08
Nod1Q8BHB0 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
Nod1Q8BHB0 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
Nod1Q8BHB0 Gm18284-201ENSMUST00000172604 624 ntBASIC21.78■■□□□ 1.08
Nod1Q8BHB0 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.78■■□□□ 1.08
Nod1Q8BHB0 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Nod1Q8BHB0 Slc35b2-207ENSMUST00000226086 850 ntBASIC21.78■■□□□ 1.08
Nod1Q8BHB0 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nod1Q8BHB0 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nod1Q8BHB0 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Nod1Q8BHB0 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nod1Q8BHB0 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Nod1Q8BHB0 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nod1Q8BHB0 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nod1Q8BHB0 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nod1Q8BHB0 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nod1Q8BHB0 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.77■■□□□ 1.08
Nod1Q8BHB0 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.77■■□□□ 1.08
Nod1Q8BHB0 Gm8493-201ENSMUST00000196881 489 ntBASIC21.77■■□□□ 1.08
Nod1Q8BHB0 Gm21168-201ENSMUST00000199646 1096 ntBASIC21.77■■□□□ 1.08
Nod1Q8BHB0 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nod1Q8BHB0 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Nod1Q8BHB0 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
Nod1Q8BHB0 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Nod1Q8BHB0 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Nod1Q8BHB0 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.76■■□□□ 1.07
Nod1Q8BHB0 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC21.76■■□□□ 1.07
Nod1Q8BHB0 Gm43759-201ENSMUST00000196925 1261 ntBASIC21.76■■□□□ 1.07
Nod1Q8BHB0 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC21.76■■□□□ 1.07
Nod1Q8BHB0 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nod1Q8BHB0 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.76■■□□□ 1.07
Nod1Q8BHB0 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Nod1Q8BHB0 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Nod1Q8BHB0 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Nod1Q8BHB0 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Nod1Q8BHB0 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Nod1Q8BHB0 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Nod1Q8BHB0 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Nod1Q8BHB0 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
Nod1Q8BHB0 Gm5297-201ENSMUST00000198555 1171 ntBASIC21.74■■□□□ 1.07
Nod1Q8BHB0 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Nod1Q8BHB0 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nod1Q8BHB0 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Nod1Q8BHB0 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Nod1Q8BHB0 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Nod1Q8BHB0 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Nod1Q8BHB0 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Nod1Q8BHB0 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Nod1Q8BHB0 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Nod1Q8BHB0 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.72■■□□□ 1.07
Nod1Q8BHB0 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Nod1Q8BHB0 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Nod1Q8BHB0 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Nod1Q8BHB0 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Nod1Q8BHB0 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nod1Q8BHB0 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nod1Q8BHB0 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Nod1Q8BHB0 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Nod1Q8BHB0 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nod1Q8BHB0 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nod1Q8BHB0 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
Nod1Q8BHB0 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Nod1Q8BHB0 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC21.71■■□□□ 1.07
Nod1Q8BHB0 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Nod1Q8BHB0 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Nod1Q8BHB0 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Nod1Q8BHB0 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Nod1Q8BHB0 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Nod1Q8BHB0 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Nod1Q8BHB0 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Nod1Q8BHB0 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nod1Q8BHB0 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nod1Q8BHB0 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nod1Q8BHB0 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nod1Q8BHB0 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nod1Q8BHB0 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nod1Q8BHB0 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nod1Q8BHB0 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Nod1Q8BHB0 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Nod1Q8BHB0 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Nod1Q8BHB0 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Nod1Q8BHB0 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC21.69■■□□□ 1.06
Nod1Q8BHB0 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC21.69■■□□□ 1.06
Nod1Q8BHB0 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms